CX078278
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_THEAC (DNA ligase OS=Thermoplasma acidophilum GN=lig PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.524e-36 Identity = 73/173 (42.20%), Postives = 109/173 (63.01%), Query Frame = -2 Query: 288 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 803 D+ Y+ R W+KLK+DY + D+LDL + AF+G G+R G YGA LLA Y+ N+ F+++CK+G+GFS+ +L + + K +P R + PDVWF P V EV A++T+SP+H A G ++ D G+S+RFPR + REDK PE +++S ++ EMY QK Sbjct: 410 DSFYKAGARGWLWIKLKRDYQAQLWDTLDLTVVGAFYGHGRRKGTYGALLLATYNDKNDTFETVCKLGSGFSDDVLFSLPKKF-EQYVSKEKP-ARVISNLEPDVWFYPAVVMEVIGAEITVSPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDSTTSREILEMYKEQK 580
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_THEVO (DNA ligase OS=Thermoplasma volcanium GN=lig PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.306e-36 Identity = 71/173 (41.04%), Postives = 113/173 (65.32%), Query Frame = -2 Query: 288 DATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLI-RVREDKTPEQASSSEQVAEMYTAQK 803 D+ Y+ R W+KLK+DY + D++DL + AF G G+R+G YGA LLA Y+ N+ F+++CK+G+GF++ +L ++ + K +P R TI PDVW P+ V E+ A++TISPVH A G+++ D G+S+RFPR + R+DK PE +++++++ EMY QK Sbjct: 410 DSYYKAGARGWLWIKLKRDYQAQLWDTIDLTVVGAFMGHGRRSGTYGALLLATYNEKNDTFETVCKLGSGFTDDVLFSLPKRF-AEFVSKEKP-ARVVSTIEPDVWIYPSIVMEIIGAEITISPVHTCAFGIIEKDAGLSIRFPRFTGKWRDDKKPEDSTTTQEIIEMYKEQK 580
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULSH (DNA ligase OS=Sulfolobus shibatae GN=lig PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.344e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWIEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIY (DNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIN (DNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIM (DNA ligase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIL (DNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIK (DNA ligase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_SULIA (DNA ligase OS=Sulfolobus islandicus (strain M.16.27) GN=lig PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 69/172 (40.12%), Postives = 108/172 (62.79%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 +DA Y+ R W+KLK+DY + D++DLV + F+G+GKR G + L+A Y+ + F+S+CK+ +GFS+ L+E L I + + R + PD+W EP V E+ A++TISP+H VV+ D G+S+RFPR IR R+DK+PE A++++++ EMY Q Sbjct: 418 KDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDTFESVCKVASGFSDEQLDELQKKLME--IKRDIKHPRVNSKMEPDIWVEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQ 587
BLAST of CX078278 vs. ExPASy Swiss-Prot
Match: DNLI_STAMF (DNA ligase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=lig PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 9.592e-36 Identity = 71/172 (41.28%), Postives = 109/172 (63.37%), Query Frame = -2 Query: 291 RDATYEPSKRSLNWLKLKKDYIESIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDSNNEEFQSICKIGTGFSEAMLEERSSSLRSKVIPKPRPYYRFADTISPDVWFEPTEVWEVKAADLTISPVHRAAIGVVDPDKGISLRFPRLIRVREDKTPEQASSSEQVAEMYTAQ 806 ++A Y+ R W+K K+DY + D++DLV I AF+GRG+R G YGA L+A Y+ + + F+S+CK+G+GF + +++ L+ +I P R + PDVW P V E+ A+LT+SP+H + ++ P GIS+RFPR IR R DK PE A++S+++ EMY Q Sbjct: 422 KNAIYQAGTRGWLWIKYKRDYKSEMIDTVDLVVIGAFYGRGRRGGKYGALLMASYNPDKDVFESVCKVGSGFKDEDIDKLPEMLKPYIIEHKHP--RVVARMKPDVWVTPALVAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEMYKRQ 591 The following BLAST results are available for this feature:
BLAST of CX078278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 94
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078278 ID=CX078278; Name=CX078278; organism=Citrus sinensis; type=EST; length=807bpback to top |