CX078277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.745e-21 Identity = 66/204 (32.35%), Postives = 94/204 (46.08%), Query Frame = 1 Query: 172 WE-PRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKW 768 W+ P Y++ +S EE E + +A P + ++TV D TG + R S ++L T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW Sbjct: 333 WDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL-------------------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKW 517
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.633e-19 Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1 Query: 160 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLEN--GEGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 EVI P +YH+F+S EE + + LA P +++S V + K R S +L A T L ++ E LQV++Y G YEPHFD+ + G R AT+++YLS VE GG T F GN S P + +A LFW ++ D +LH GCPV+ G+KW + KWI Sbjct: 340 EVIHLRPLVALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPVLVTLDRRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDDDTLHAGCPVLVGDKWVANKWI 527
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA3_HUMAN (Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.133e-19 Identity = 66/209 (31.58%), Postives = 92/209 (44.02%), Query Frame = 1 Query: 160 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLEN--GEGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 EVI EP +YH+F+S E + + LA P +++S V + K R S +L A T L + E LQV++Y G YEPHFD+ + G R+AT ++YLS VE GG T F A LS+ AL +W++ D +LH GCPV+ G+KW + KWI Sbjct: 340 EVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPKLVTLNHRIAALTGLDVRPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYAN-------------------LSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWI 527
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.638e-19 Identity = 67/210 (31.90%), Postives = 95/210 (45.24%), Query Frame = 1 Query: 160 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLEN--GEGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 EV+ P +YH+F+S EE + + LA P +++S V + K R S +L A T L ++ E LQV++Y G YEPHFD+ + G R+AT ++YLS VE GG T F GN S P + +A LFW ++ D +LH GCPV+ G+KW + KWI Sbjct: 338 EVVHLRPLIALYHDFVSDEEAQKIRELAEPWLQRSVVASGE--KQLQVEYRISKSAWLKDTVDPMLVTLDHRIAALTGLDIQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWI 525
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HA3_BOVIN (Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.638e-19 Identity = 68/210 (32.38%), Postives = 95/210 (45.24%), Query Frame = 1 Query: 160 EVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLEN--GEGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 771 EVI EP +YH+F+S E + + LA P +++S V + K R S +L A T L ++ E LQV++Y G YEPHFD+ + N G R+AT ++YLS VE GG T F GN S P + +A LFW ++ D +LH CPV+ G+KW + KWI Sbjct: 340 EVIHLEPYVVLYHDFVSDAEAQTIRGLAEPWLQRSVVASGE--KQLPVEYRISKSAWLKDTVDPVLVTLDHRIAALTGLDVQPPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWI 527
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4H_MIMIV (Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.431e-15 Identity = 57/208 (27.40%), Postives = 86/208 (41.35%), Query Frame = 1 Query: 181 RAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXXADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT-----KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDA-ALDPSSLHGGCPVIKGNKWSSTKWIRVNEY 786 + FV +N ++ +C+ ++ A + DS D +R S +++ F +P +N E LQV+ Y Q Y H D D + GGQR+ TVL+YL++ G T FPN KPK GDAL+F+ + ++ P SLH G PV G KW + W R ++ Sbjct: 59 KPFVLNNLINPTKCQEIMQFAN-----GKLFDSQVLSGTDKNIRNSQQMWISKNNPMVKPIFENICRQFN-VPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYLNNEFSDGHTYFPN-------------------LNQKFKPKTGDALVFYPLANNSNKCHPYSLHAGMPVTSGEKWIANLWFRERKF 241
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HTM_MOUSE (Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12 Identity = 51/159 (32.08%), Postives = 69/159 (43.40%), Query Frame = 1 Query: 400 LENGEGLQVLHYEAGQKYEPHFD--------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAA-----LDPSSLHGGCPVIKGNKWSSTKWIRVN 780 +E E LQV+ Y G Y H D +E R TVL YL++V GGETVFP A ++E+S C K L +KP+ G A+ +++ PD +D SLHGGC V +G KW + WI V+ Sbjct: 309 VEFSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLVTRGTKWIANNWINVD 462
BLAST of CX078277 vs. ExPASy Swiss-Prot
Match: P4HTM_HUMAN (Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.625e-12 Identity = 51/159 (32.08%), Postives = 69/159 (43.40%), Query Frame = 1 Query: 400 LENGEGLQVLHYEAGQKYEPHFD--------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAA-----LDPSSLHGGCPVIKGNKWSSTKWIRVN 780 +E E LQV+ Y G Y H D +E R TVL YL++V GGETVFP A ++E+S C K L +KP+ G A+ +++ PD +D SLHGGC V +G KW + WI V+ Sbjct: 308 VELSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLVTRGTKWIANNWINVD 461 The following BLAST results are available for this feature:
BLAST of CX078277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078277 ID=CX078277; Name=CX078277; organism=Citrus sinensis; type=EST; length=803bpback to top |