CX078276
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA2_HUMAN (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17 Identity = 57/176 (32.39%), Postives = 80/176 (45.45%), Query Frame = -2 Query: 360 MRKSTVVDSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFM----DEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKW 875 + ++TV D TG + R S ++L + T L ++ E LQV +Y G +YEPHFD+ D F G R+AT L Y+SDVE GG TVFP+ G +I PK G A+ ++++ D + H CPV+ G KW S KW Sbjct: 361 LARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSDVEAGGATVFPDL-------------------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKW 517
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4H_MIMIV (Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L593 PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.016e-13 Identity = 52/177 (29.38%), Postives = 72/177 (40.68%), Query Frame = -2 Query: 342 DSDTGKSKDSRVRTSSGTFLAXXXXXXXXXXXXXIADFTFLPLENGEGLQVLHYEAGQKYEPHFDYFMDEFNT-----KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDA-ALDPSSLHGGCPVIKGNKWSSTKWIRVNEY 854 DS D +R S +++ F +P +N E LQV+ Y Q Y H D D + GGQR+ TVL+YL++ G T FPN KPK GDAL+F+ + ++ P SLH G PV G KW + W R ++ Sbjct: 85 DSQVLSGTDKNIRNSQQMWISKNNPMVKPIFENICRQFN-VPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIERGGQRILTVLIYLNNEFSDGHTYFPN-------------------LNQKFKPKTGDALVFYPLANNSNKCHPYSLHAGMPVTSGEKWIANLWFRERKF 241
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA3_HUMAN (Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13 Identity = 44/123 (35.77%), Postives = 59/123 (47.97%), Query Frame = -2 Query: 357 EGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFWSMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 716 E LQV++Y G YEPHFD+ + G R+AT ++YLS VE GG T F A LS+ AL +W++ D +LH GCPV+ G+KW + KWI Sbjct: 424 EYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYAN-------------------LSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPVLVGDKWVANKWI 527
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA3_RAT (Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.662e-13 Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = -2 Query: 357 EGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 716 E LQV++Y G YEPHFD+ + G R AT+++YLS VE GG T F GN S P + +A LFW ++ D +LH GCPV+ G+KW + KWI Sbjct: 424 EYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDDDTLHAGCPVLVGDKWVANKWI 527
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA3_MOUSE (Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12 Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = -2 Query: 357 EGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 716 E LQV++Y G YEPHFD+ + G R+AT ++YLS VE GG T F GN S P + +A LFW ++ D +LH GCPV+ G+KW + KWI Sbjct: 422 EYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKWVANKWI 525
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HA3_BOVIN (Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.001e-12 Identity = 46/124 (37.10%), Postives = 61/124 (49.19%), Query Frame = -2 Query: 357 EGLQVLHYEAGQKYEPHFDYFMDEFNT---KNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELSECGKTGLSIKPKMGDALLFW-SMKPDAALDPSSLHGGCPVIKGNKWSSTKWI 716 E LQV++Y G YEPHFD+ + N G R+AT ++YLS VE GG T F GN S P + +A LFW ++ D +LH CPV+ G+KW + KWI Sbjct: 424 EYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAF--IYGNFSV------------------PVVKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKWVANKWI 527
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HTM_MOUSE (Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 51/159 (32.08%), Postives = 69/159 (43.40%), Query Frame = -2 Query: 348 LENGEGLQVLHYEAGQKYEPHFD--------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAA-----LDPSSLHGGCPVIKGNKWSSTKWIRVN 728 +E E LQV+ Y G Y H D +E R TVL YL++V GGETVFP A ++E+S C K L +KP+ G A+ +++ PD +D SLHGGC V +G KW + WI V+ Sbjct: 309 VEFSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLVTRGTKWIANNWINVD 462
BLAST of CX078276 vs. ExPASy Swiss-Prot
Match: P4HTM_HUMAN (Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 6.486e-12 Identity = 51/159 (32.08%), Postives = 69/159 (43.40%), Query Frame = -2 Query: 348 LENGEGLQVLHYEAGQKYEPHFD--------------YFMDEFNTKNGGQRMATVLMYLSDVEEGGETVFPNAQGNISAVPWWNELS-------------ECGKTGLSIKPKMGDALLFWSMKPDAA-----LDPSSLHGGCPVIKGNKWSSTKWIRVN 728 +E E LQV+ Y G Y H D +E R TVL YL++V GGETVFP A ++E+S C K L +KP+ G A+ +++ PD +D SLHGGC V +G KW + WI V+ Sbjct: 308 VELSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHTKLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRT-----YDEMSLIQDDVDLRDTRRHCDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLVTRGTKWIANNWINVD 461 The following BLAST results are available for this feature:
BLAST of CX078276 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078276 ID=CX078276; Name=CX078276; organism=Citrus sinensis; type=EST; length=879bpback to top |