CX078269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NUOH_HELPH (NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori (strain HPAG1) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 57/169 (33.73%), Postives = 96/169 (56.80%), Query Frame = -1 Query: 309 ISIYVLAITIGVLVIV-----------WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVL---------ADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 755 +S Y++ I +L++V ++ER++ A Q+R+GP Y P G+LQ ADG KL KE+++P N +F++ P IA+++ +S + IPF N L +D+NIG ++A+ + +++G SNNKYS +G RA Q +S+E+ TL +L+ Sbjct: 1 MSAYIIETLIKILILVAVFSALGGFATYIERKVLAYFQRRLGPCYVGPFGLLQVAADGIKLFTKEDIIPQGANKFIFTLAPIIAMVSAFVSMAPIPFFPNFTLFGYEIKPLISDINIGFLFFLAVGAAGIYAPILAGLASNNKYSLIGSARATIQLLSFEVVSTLTILA 169
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NUOH_HELPG (NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori (strain G27) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 57/169 (33.73%), Postives = 96/169 (56.80%), Query Frame = -1 Query: 309 ISIYVLAITIGVLVIV-----------WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVL---------ADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 755 +S Y++ I +L++V ++ER++ A Q+R+GP Y P G+LQ ADG KL KE+++P N +F++ P IA+++ +S + IPF N L +D+NIG ++A+ + +++G SNNKYS +G RA Q +S+E+ TL +L+ Sbjct: 1 MSAYIIETLIKILILVAVFSALGGFATYIERKVLAYFQRRLGPCYVGPFGLLQVAADGIKLFTKEDIIPQGANKFIFTLAPIIAMVSAFVSMAPIPFFPNFTLFGYEIKPLISDINIGFLFFLAVGAAGIYAPILAGLASNNKYSLIGSARATIQLLSFEVVSTLTILA 169
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NUOH_HELP2 (NADH-quinone oxidoreductase subunit H OS=Helicobacter pylori (strain P12) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 57/169 (33.73%), Postives = 96/169 (56.80%), Query Frame = -1 Query: 309 ISIYVLAITIGVLVIV-----------WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVL---------ADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 755 +S Y++ I +L++V ++ER++ A Q+R+GP Y P G+LQ ADG KL KE+++P N +F++ P IA+++ +S + IPF N L +D+NIG ++A+ + +++G SNNKYS +G RA Q +S+E+ TL +L+ Sbjct: 1 MSAYIIETLIKILILVAVFSALGGFATYIERKVLAYFQRRLGPCYVGPFGLLQVAADGIKLFTKEDIIPQGANKFIFTLAPIIAMVSAFVSMAPIPFFPNFTLFGYEIKPLISDINIGFLFFLAVGAAGIYAPILAGLASNNKYSLIGSARATIQLLSFEVVSTLTILA 169
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NUOH_FRAAA (NADH-quinone oxidoreductase subunit H OS=Frankia alni (strain ACN14a) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 58/165 (35.15%), Postives = 100/165 (60.61%), Query Frame = -1 Query: 306 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFS---------YNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 773 L +L ++++ + + + IV+ ER++ A +QQR+GP P G LQ+LADG KL+ KE+L+P+ + +F + P ++ + L+++VIPF L LADL + + +A +S+ GL++SG+ S + Y LG LR+AAQ ISYE+ + L +++ Sbjct: 28 LILLKGVAVFAFLLLMTLFSIVF-ERKVVAKMQQRVGPNRHGPKGWLQSLADGAKLMLKEDLIPALADKPIFILAPILSAVPAFLAFAVIPFGPEVSIFGERTTLQLADLPVSVLYMLAAASLGVYGLILSGWSSGSTYPLLGSLRSAAQIISYEVAMGLSFVAV 191
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NUOH_AZOVD (NADH-quinone oxidoreductase subunit H OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 55/157 (35.03%), Postives = 98/157 (62.42%), Query Frame = -1 Query: 306 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 776 ++ +L I I ++ + G L + ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L++++V+P + +ADLNIG+ + A++ +A +L +G+ SNNK++ LG LRA+AQ+ISYE+ + L ++ I Sbjct: 12 VVAILKAIVILLVVVVCGAL-LSFIERRLLGLWQDRYGPNRVGPFGMFQLGADMLKMFFKEDWTPPFADRLIFTLAPIVAMSALLMAFAVVPVTPTWGVADLNIGLLFFFAMAGLAVYAVLFAGWSSNNKFALLGSLRASAQTISYEVFMALALMGI 167
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1M_VARJO (NADH-ubiquinone oxidoreductase chain 1 OS=Varanus jobiensis GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 61/157 (38.85%), Postives = 96/157 (61.15%), Query Frame = -1 Query: 306 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 776 ++ ++ P++ Y++ I I V + ER+I +Q R GP P G+LQ +ADG KL KE + P + L + P +A+ +L ++ IP Y L A+LN+G +AISS+A +L +G+ SN+KY+ +G LRA AQ+ISYE+ L + +LSI Sbjct: 3 LITIINPLT-YIVPILIAVAFLTLTERKILGYMQLRKGPNITGPYGLLQPIADGLKLFIKEPVRPLNTSPILLILSPVLALTMAMLIWTPIPMPYTL--ANLNLGFLSILAISSMAVNSILWAGWASNSKYALIGSLRAVAQTISYEVTLGIILLSI 156
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1M_SQUAC (NADH-ubiquinone oxidoreductase chain 1 OS=Squalus acanthias GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 58/157 (36.94%), Postives = 98/157 (62.42%), Query Frame = -1 Query: 306 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 776 +L+++ P++ Y++ I + + +ER+I +Q R GP P G+LQ +ADG KL KE + PS + LF P++A+ LL + +P + ++ +LN+G+ +A+SS+ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +LS+ Sbjct: 6 LLYLINPLA-YIVPILLATAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPTLALTLALLMWMPLPLPHAII--NLNLGLLFILAVSSLTVYTILGSGWASNSKYALMGALRAVAQTISYEVSLGLILLSM 159
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1M_SHEEP (NADH-ubiquinone oxidoreductase chain 1 OS=Ovis aries GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = -1 Query: 300 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 743 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P+ + S+F + P +A+ L + +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSISMFILAPILALTLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1M_PIG (NADH-ubiquinone oxidoreductase chain 1 OS=Sus scrofa GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = -1 Query: 300 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 743 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P+ + S+F I P +A+ L + +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CX078269 vs. ExPASy Swiss-Prot
Match: NU1M_MACRO (NADH-ubiquinone oxidoreductase chain 1 OS=Macropus robustus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.474e-23 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = -1 Query: 300 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYSVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 749 +Y++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P + S+F I P +A+ L ++ +P + L+ DLN+G+ +++S ++ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LSI L Sbjct: 8 LYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSVSMFIIAPILALTLALTIWTPLPMPHALI--DLNLGLLFILSLSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIML 155 The following BLAST results are available for this feature:
BLAST of CX078269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078269 ID=CX078269; Name=CX078269; organism=Citrus sinensis; type=EST; length=818bpback to top |