CX078268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_CYCTA (30S ribosomal protein S15, chloroplastic OS=Cycas taitungensis GN=rps15 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.955e-17 Identity = 50/90 (55.56%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 M KN+ I + K+ + S VE Q++ T+ I RLT HLELHR+DYSSQRGL +IL KR+RLL YLSK+NR RY++LI +L+IR K R Sbjct: 1 MPKNSPIRSSLILKERRRS--VESQIYHLTDRILRLTHHLELHRRDYSSQRGLWQILGKRKRLLVYLSKRNRPRYEDLIGQLSIRGLKIR 88
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_SOLTU (Putative membrane protein ycf1 OS=Solanum tuberosum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 5.011e-17 Identity = 37/49 (75.51%), Postives = 44/49 (89.80%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 149 K +LI+ KFF+W N RLEDL CMNRYWF+TNNGSRFS++R+HMYPRLKI Sbjct: 1838 KKKLIKFKFFLWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYPRLKI 1886
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_IPOPU (Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17 Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 152 KN+LIQ KFF+W N RLEDL CMNRYWF+TNNGSRFS++R+HMY LKIR Sbjct: 2008 KNELIQFKFFLWPNYRLEDLACMNRYWFDTNNGSRFSILRIHMYLPLKIR 2057
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.544e-17 Identity = 37/48 (77.08%), Postives = 44/48 (91.67%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLK 146 K +LI+LKFF+W N RLEDL CMNRYWF+TNNGSRFSM+R++MYPRLK Sbjct: 1825 KKELIKLKFFLWPNYRLEDLACMNRYWFDTNNGSRFSMLRIYMYPRLK 1872
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.547e-17 Identity = 36/49 (73.47%), Postives = 44/49 (89.80%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 149 K +LI+LKFF+W N RLEDL CMNRYWF+TNNG RF+M+R+HMYPRL+I Sbjct: 1828 KKKLIKLKFFLWPNYRLEDLSCMNRYWFDTNNGGRFTMIRIHMYPRLQI 1876
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_CRYJA (30S ribosomal protein S15, chloroplastic OS=Cryptomeria japonica GN=rps15 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.597e-17 Identity = 48/85 (56.47%), Postives = 61/85 (71.76%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIR 772 M+KN +SVR + GSVE QV T I+RLT HL+LH +DYSSQRGL KI+ KR+RLL YL KK+R+RYK LI +L++R Sbjct: 1 MIKN--LSVRPSLIPREQRGSVESQVCYLTGRIKRLTEHLDLHGRDYSSQRGLWKIVGKRKRLLIYLFKKDRLRYKSLIGQLDMR 83
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16 Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 3 Query: 3 KNQLIQLK---FFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 152 KNQLI+LK F+W N RLEDL CMNRYWF+TNNGS FSM+R+HMYPRLKIR Sbjct: 1841 KNQLIKLKKLKLFLWPNYRLEDLACMNRYWFDTNNGSCFSMIRIHMYPRLKIR 1893
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_AETCO (Putative membrane protein ycf1 OS=Aethionema cordifolium GN=ycf1-A PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.116e-16 Identity = 37/49 (75.51%), Postives = 41/49 (83.67%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKI 149 K LI LKFF+W N RLEDL CMNRYWFNTNNG+ FSM+R+HMY RLKI Sbjct: 1724 KTNLINLKFFLWPNFRLEDLACMNRYWFNTNNGNHFSMIRIHMYTRLKI 1772
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_ANGEV (30S ribosomal protein S15, chloroplastic OS=Angiopteris evecta GN=rps15 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.466e-16 Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 527 NAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 N IS+ K +GSVEFQ++ TN + +LTSHL+ H KDYSSQRGL K+L KR+RLL YLSK + Y+ LI+KL IR K R Sbjct: 2 NKKISLHSSSGPVKKTGSVEFQIYHLTNQVIKLTSHLKQHSKDYSSQRGLWKMLGKRKRLLVYLSKNDINCYENLINKLGIRGLKIR 88
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: YCF1_CUCSA (Putative membrane protein ycf1 OS=Cucumis sativus GN=ycf1-A PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.904e-16 Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 3 Query: 3 KNQLIQLKFFIWANSRLEDLICMNRYWFNTNNGSRFSMVRVHMYPRLKIR 152 +NQL LK F+W N RLEDL CMNRYWF+TNN SRFSM+R+HMYP+LKIR Sbjct: 1830 QNQLKNLKLFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1879 The following BLAST results are available for this feature:
BLAST of CX078268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078268 ID=CX078268; Name=CX078268; organism=Citrus sinensis; type=EST; length=868bpback to top |