CX078268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_CUCSA (30S ribosomal protein S15, chloroplastic OS=Cucumis sativus GN=rps15 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.133e-31 Identity = 68/90 (75.56%), Postives = 80/90 (88.89%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+F SV QE+K++N GSVEFQV FTN IRRLTSHLELH+KDY SQRGLRKIL KRQRLL+YLSKKN++RYKELI++L+IRESK + Sbjct: 1 MVKNSFSSVISQEEKKENGGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLSYLSKKNKMRYKELINQLDIRESKTQ 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_ARATH (30S ribosomal protein S15, chloroplastic OS=Arabidopsis thaliana GN=rps15 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.133e-31 Identity = 71/90 (78.89%), Postives = 78/90 (86.67%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 M+KN IS +E+KE++ GSVEFQVF FTN IRRLTSHLELHRKDY SQRGLRKIL KRQRLLAYLSKKNRVRYKELI++LNIRE K R Sbjct: 1 MIKNIVISF--EEQKEESRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQRLLAYLSKKNRVRYKELINQLNIRELKTR 88
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_PIPCE (30S ribosomal protein S15, chloroplastic OS=Piper cenocladum GN=rps15 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.009e-31 Identity = 68/90 (75.56%), Postives = 74/90 (82.22%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+FIS QE+KEKN GS EFQ+ FT IRRLTSHLELH+KDY SQRGLRKIL KRQRLL YLS KNRVRYKELI +L+IRE K R Sbjct: 1 MVKNSFISAISQEEKEKNKGSTEFQILNFTKRIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLTYLSNKNRVRYKELIGQLDIREPKTR 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_SOYBN (30S ribosomal protein S15, chloroplastic OS=Glycine max GN=rps15 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.046e-30 Identity = 67/90 (74.44%), Postives = 79/90 (87.78%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+ I V QEKKEKN GSVEFQ+F+FT+ IRRLTSH ELHRKDY SQRGLRKIL KRQRLL+YLSKK+R+RYK+LI++ +IRES+ R Sbjct: 1 MVKNSIIPVISQEKKEKNPGSVEFQIFKFTDRIRRLTSHFELHRKDYLSQRGLRKILGKRQRLLSYLSKKDRIRYKKLINQFDIRESQIR 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_IPOPU (30S ribosomal protein S15, chloroplastic OS=Ipomoea purpurea GN=rps15-A PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.046e-30 Identity = 67/88 (76.14%), Postives = 78/88 (88.64%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESK 781 MVKN FISV QE+ ++N GSVEFQ+F FTN I+RLTSHL+LH+KDY SQ+GLRKIL KRQRLLAYLSKKN+VRYKELI KL+IRE+K Sbjct: 1 MVKNLFISVISQEETKENRGSVEFQIFNFTNKIQRLTSHLKLHKKDYLSQKGLRKILGKRQRLLAYLSKKNKVRYKELIEKLDIRETK 88
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_HELAN (30S ribosomal protein S15, chloroplastic OS=Helianthus annuus GN=rps15 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.046e-30 Identity = 70/92 (76.09%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 518 MVKNAFISV--RVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+FIS+ + QE+ ++N GSVEFQV FTN IRRLTSHLELH+KDY SQRGLRKIL KRQRLLAYLSKKNRVRYKELI +L+IRE K R Sbjct: 1 MVKNSFISIILKEQEENKENRGSVEFQVVSFTNKIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLAYLSKKNRVRYKELIGQLDIRERKTR 92
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_LEMMI (30S ribosomal protein S15, chloroplastic OS=Lemna minor GN=rps15-A PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.366e-30 Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 518 MVKNAFISV--RVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+FIS+ + QE+KE+N GSVEFQVF FTN IRRLTSHL LH+KD+SSQRGLR IL KRQRLLAYLSKKNRVRYK+LI +L+IRE K R Sbjct: 1 MVKNSFISIISQEQEEKEENKGSVEFQVFSFTNKIRRLTSHLGLHKKDFSSQRGLRIILGKRQRLLAYLSKKNRVRYKKLIGQLDIREPKTR 92
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_LACSA (30S ribosomal protein S15, chloroplastic OS=Lactuca sativa GN=rps15 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.366e-30 Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKE--KNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+FIS+ QE++E +N GSVEFQV FTN IR+LTSHLELH+KDY SQRGLRKIL KRQRLLAYLSKKNR RYKELI +LNIRE K R Sbjct: 1 MVKNSFISIIFQEQEENKENRGSVEFQVVSFTNKIRKLTSHLELHKKDYLSQRGLRKILGKRQRLLAYLSKKNRARYKELIGQLNIRERKTR 92
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_VITVI (30S ribosomal protein S15, chloroplastic OS=Vitis vinifera GN=rps15 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.330e-30 Identity = 72/90 (80.00%), Postives = 76/90 (84.44%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN FISV Q KE N GSVEFQVF FTN IRRLTSHLELHRKDY SQRGLRKIL KRQRLL+YL+KKNRVRYKELI +L IRE+K R Sbjct: 1 MVKNLFISVISQ--KEANRGSVEFQVFSFTNKIRRLTSHLELHRKDYLSQRGLRKILGKRQRLLSYLAKKNRVRYKELIGQLGIRETKIR 88
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_TOBAC (30S ribosomal protein S15, chloroplastic OS=Nicotiana tabacum GN=rps15 PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.191e-30 Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+ ISV QE+K GSVEFQVF FTN IRRLTSHLELH+KDY SQRGL+KIL KRQRLLAYLSKKNRVRYKELI++L+IRE+K R Sbjct: 1 MVKNSVISVISQEEKR---GSVEFQVFNFTNKIRRLTSHLELHKKDYLSQRGLKKILGKRQRLLAYLSKKNRVRYKELINQLDIRETKTR 87 The following BLAST results are available for this feature:
BLAST of CX078268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078268 ID=CX078268; Name=CX078268; organism=Citrus sinensis; type=EST; length=868bpback to top |