CX078268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_PANGI (30S ribosomal protein S15, chloroplastic OS=Panax ginseng GN=rps15 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.577e-29 Identity = 65/90 (72.22%), Postives = 75/90 (83.33%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 M+KN F + ++E+ + N GS EFQV FTN IRRLTSHLELH+KDY SQRGLRKIL KRQRLLAYLSKKNRVRYKELI +L+IRE+K R Sbjct: 1 MIKNPFSGIILKEENKDNRGSAEFQVVSFTNRIRRLTSHLELHKKDYLSQRGLRKILGKRQRLLAYLSKKNRVRYKELIGRLDIRETKIR 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_PELHO (30S ribosomal protein S15, chloroplastic OS=Pelargonium hortorum GN=rps15-A PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.365e-29 Identity = 67/90 (74.44%), Postives = 75/90 (83.33%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVK ISV QE+KEKN GSVEFQV FT I +++SHL+LHRKDY SQRGL KIL KRQRLL+YLSKKNRVRYKELI++LNIRESK R Sbjct: 1 MVKTPLISVISQEEKEKNRGSVEFQVLCFTKKIDQISSHLKLHRKDYLSQRGLHKILGKRQRLLSYLSKKNRVRYKELINRLNIRESKTR 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_GUIAB (30S ribosomal protein S15, chloroplastic OS=Guizotia abyssinica GN=rps15 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.395e-29 Identity = 66/92 (71.74%), Postives = 77/92 (83.70%), Query Frame = 2 Query: 518 MVKNAFISV--RVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 M+KN+F S+ + QE+ ++N GSVEFQV FTN IR+LTSHLELH+KDY SQRGLRKIL KRQRLLAYLSKKNR RYKELI +L+IRE K R Sbjct: 1 MLKNSFFSIILKEQEENKENRGSVEFQVVSFTNKIRKLTSHLELHKKDYLSQRGLRKILGKRQRLLAYLSKKNRARYKELIGQLDIRERKTR 92
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_PHAAO (30S ribosomal protein S15, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rps15 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.740e-29 Identity = 64/86 (74.42%), Postives = 75/86 (87.21%), Query Frame = 2 Query: 524 KNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESK 781 KN+FISV QE+KE+NSGSVEFQVF FT+ IRRLTSHLELH++D+ SQ+GLR IL KRQRLL YLSKKN+VRYK+L +LNIRE K Sbjct: 4 KNSFISVITQEEKEENSGSVEFQVFHFTSKIRRLTSHLELHKRDFLSQKGLRIILGKRQRLLTYLSKKNKVRYKKLTDQLNIREPK 89
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_ILLOL (30S ribosomal protein S15, chloroplastic OS=Illicium oligandrum GN=rps15 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 2.181e-28 Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESK 781 MVK +FI V QE+K+ GSVEFQV FTN IRRLTSHLELHRKDY SQRGLR+IL KRQRLLAYLSKKNRVRYKELIS+L+IRE K Sbjct: 1 MVKKSFILVIPQEEKK---GSVEFQVSSFTNKIRRLTSHLELHRKDYLSQRGLRRILGKRQRLLAYLSKKNRVRYKELISQLDIREPK 85
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_JASNU (30S ribosomal protein S15, chloroplastic OS=Jasminum nudiflorum GN=rps15 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.849e-28 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKE---LISKLNIRESKNR 787 MV+N+FIS+ Q++ ++N GSVEFQV FT IRRLTSHL+LH+ DYSS+RGLRKIL KRQR+LAYLSKKNRVRY+E LIS+LNIRE+K R Sbjct: 1 MVRNSFISIISQKENKENRGSVEFQVLSFTTKIRRLTSHLKLHKTDYSSERGLRKILGKRQRVLAYLSKKNRVRYQELQDLISQLNIRETKTR 93
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_PHAVU (30S ribosomal protein S15, chloroplastic OS=Phaseolus vulgaris GN=rps15 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.859e-28 Identity = 63/90 (70.00%), Postives = 76/90 (84.44%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKN+FI V QEKK KN G VEFQ+F+FTN IRRLTSH ELH KDYSSQ GLRKIL KRQRLL+YLSKK+ ++YK+LI++ +IR+S+ R Sbjct: 1 MVKNSFIPVLSQEKKGKNPGLVEFQIFQFTNRIRRLTSHFELHPKDYSSQTGLRKILGKRQRLLSYLSKKDGIQYKKLINQFDIRQSQIR 90
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_NYMAL (30S ribosomal protein S15, chloroplastic OS=Nymphaea alba GN=rps15 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.414e-27 Identity = 67/88 (76.14%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESK 781 MVKN+ ISV QE+K GSVEFQVF FTN I RLTSHLELHR+DY SQRGLRKIL KRQRLL YLSKKNRVRY+ELI +L IRE K Sbjct: 1 MVKNSPISVIPQEEKR---GSVEFQVFNFTNKIERLTSHLELHRRDYLSQRGLRKILGKRQRLLVYLSKKNRVRYRELIGQLGIREPK 85
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_OENPA (30S ribosomal protein S15, chloroplastic OS=Oenothera parviflora GN=rps15 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.412e-27 Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKNAFISV QE+ N GSVEFQV FTN IRRLTSHLE HRKD+ SQRGLRKIL KRQRLL+YLSKK++VRY ELIS+L+IRE R Sbjct: 1 MVKNAFISVISQEE---NRGSVEFQVVSFTNKIRRLTSHLEFHRKDFLSQRGLRKILGKRQRLLSYLSKKDKVRYTELISQLDIRELTTR 87
BLAST of CX078268 vs. ExPASy Swiss-Prot
Match: RR15_OENGL (30S ribosomal protein S15, chloroplastic OS=Oenothera glazioviana GN=rps15 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.412e-27 Identity = 67/90 (74.44%), Postives = 74/90 (82.22%), Query Frame = 2 Query: 518 MVKNAFISVRVQEKKEKNSGSVEFQVFRFTNTIRRLTSHLELHRKDYSSQRGLRKILEKRQRLLAYLSKKNRVRYKELISKLNIRESKNR 787 MVKNAFISV QE+ N GSVEFQV FTN IRRLTSHLE HRKD+ SQRGLRKIL KRQRLL+YLSKK++VRY ELIS+L+IRE R Sbjct: 1 MVKNAFISVISQEE---NRGSVEFQVVSFTNKIRRLTSHLEFHRKDFLSQRGLRKILGKRQRLLSYLSKKDKVRYTELISQLDIRELTTR 87 The following BLAST results are available for this feature:
BLAST of CX078268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 220
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078268 ID=CX078268; Name=CX078268; organism=Citrus sinensis; type=EST; length=868bpback to top |