EY702386

Overview
NameEY702386
Unique NameEY702386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: YUTF_BACSU (Uncharacterized hydrolase yutF OS=Bacillus subtilis GN=yutF PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15
Identity = 50/125 (40.00%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQD 392
            VVVG+D  I Y K   G L IR   G  FI+TN D +   T+    PG G + + +  ST  +P+ +GKP + +ME   +      S   MVGD   TDI+ G NAG  TLLV +GVT +  + D
Sbjct:  116 VVVGIDRSITYEKFAVGCLAIRN--GARFISTNGD-IAIPTERGLLPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTD 237          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAS1 (Protein nagD homolog OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=nagD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14
Identity = 50/146 (34.25%), Postives = 78/146 (53.42%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDYYTNQVSDILELL 455
            VVVGLD  + Y KL   TL +R   G  FI+TN+D V    +    PG G + + +  ST  +P+ +GKP   +M    +   +  S + MVGD  DTDI+ G N    T+ V +GVTT+  ++  S  + P Y    ++++++ L
Sbjct:  117 VVVGLDEQVTYEKLSTATLGVRN--GAKFISTNQD-VSIPKERGFLPGNGAITSVVSVSTGVQPVFIGKPEPIIMNKALEILDLDRSDVAMVGDLYDTDIMSGINVDIDTIHVQTGVTTKEEIEKKS--VPPTYTFKDLNEVIKEL 257          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAHJ (Protein nagD homolog OS=Staphylococcus haemolyticus (strain JCSC1435) GN=nagD PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.085e-14
Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDY 419
            V +GLD ++ Y KL   TL +R+  G  FI+TN D V    +    PG G + + +  ST + P  +GKP   +M+I     ++  S + MVGD  DTDI+ G N G  T+ V +GVTT   L++     QP Y
Sbjct:  117 VAIGLDENVTYEKLAVATLAVRK--GARFISTNPD-VSIPKERGFLPGNGAITSVVSVSTGQAPQFIGKPEPVIMDIALDILKLDKSDVAMVGDLYDTDIMSGINVGVDTIHVQTGVTTYEELKEKDQ--QPTY 245          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAEQ (Protein nagD homolog OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=nagD PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14
Identity = 51/134 (38.06%), Postives = 69/134 (51.49%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDY 419
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST  +P  +GKP T +M        +  S + MVGD  DTDI+ G N G  T+ V +GV+T   +Q  S  I P Y
Sbjct:  117 VVIGLDEKVTYEKLSIATLAVRN--GAKFISTNPD-VSIPKERGFLPGNGAITSVVSVSTGIQPEFIGKPETIIMSKSLDILGLEKSEVAMVGDLYDTDIMSGINVGIDTIHVQTGVSTYEDIQ--SKEIPPTY 245          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAES (Protein nagD homolog OS=Staphylococcus epidermidis (strain ATCC 12228) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSNNIQPDY 419
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST  +P  +GKP   +M        +  S + MVGD  DTDI+ G N G  T+ V +GV+T   +Q  S  I P Y
Sbjct:  117 VVIGLDEKVTYEKLSIATLAVRN--GAKFISTNPD-VSIPKERGFLPGNGAITSVVSVSTGIQPEFIGKPEPIIMSKSLDILGLEKSEVAMVGDLYDTDIMSGINVGIDTIHVQTGVSTYEDIQ--SKEIPPTY 245          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAW (Protein nagD homolog OS=Staphylococcus aureus (strain MW2) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAS (Protein nagD homolog OS=Staphylococcus aureus (strain MSSA476) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAR (Protein nagD homolog OS=Staphylococcus aureus (strain MRSA252) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGFLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAN (Protein nagD homolog OS=Staphylococcus aureus (strain N315) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254          
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAM (Protein nagD homolog OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=nagD PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254          
The following BLAST results are available for this feature:
BLAST of EY702386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
YUTF_BACSU8.310e-1540.00Uncharacterized hydrolase yutF OS=Bacillus subtili... [more]
NAGD_STAS11.085e-1434.25Protein nagD homolog OS=Staphylococcus saprophytic... [more]
NAGD_STAHJ1.085e-1437.31Protein nagD homolog OS=Staphylococcus haemolyticu... [more]
NAGD_STAEQ2.418e-1438.06Protein nagD homolog OS=Staphylococcus epidermidis... [more]
NAGD_STAES1.200e-1337.31Protein nagD homolog OS=Staphylococcus epidermidis... [more]
NAGD_STAAW1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAAS1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAAR1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAAN1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAAM1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702386 ID=EY702386; Name=EY702386; organism=Citrus sinensis; type=EST; length=649bp
CCCGCGTCCGTGGAGCAGTTGTGGTTGGATTAGATCCGCATATTAACTAT
TACAAGCTTCAGTATGGAACCCTTTGCATCCGTGAGAATCCTGGCTGCCT
TTTTATTGCTACCAATCGTGATGCAGTGGGGCATTTGACTGATTTACAAG
AGTGGCCTGGTGCCGGGTGTATGGTTGCAGCCATGTGTGCATCAACTGAA
AAAGAGCCTATTGTAGTTGGAAAGCCATCAACGTTCATGATGGAAATTTT
GTCAAAGAAATTTCAGATTGCTTCCTCCAGAATGTGTATGGTGGGTGATA
GATTAGATACTGATATTTTGTTTGGACAAAATGCTGGCTGCAAAACACTC
CTTGTTCTTTCAGGTGTGACAACTCAATCCACCCTCCAAGATCCCTCAAA
CAACATCCAACCAGATTATTACACAAATCAGGTGTCTGACATTCTTGAAT
TATTAGGACAGTAACCTTGCGATTACTGCTTCAATACTCACTTATTTGAG
GCCTGTTTGCTGGTTGCCCCATGCAGATCTTATGTATGCCCATAGAATGC
TGATTGTTTGTATTGAACTCGCTTATATTGAAACATCAAAAAGCAATTCG
CGCTTAAAACTGCAACATTGCTTTTGCTTTTAAAAAAAAAAAAAAAAAA
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