EY702386

Overview
NameEY702386
Unique NameEY702386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length649
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAC (Protein nagD homolog OS=Staphylococcus aureus (strain COL) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3 
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254
[Close]
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAA8 (Protein nagD homolog OS=Staphylococcus aureus (strain NCTC 8325) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3 
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254
[Close]
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAA3 (Protein nagD homolog OS=Staphylococcus aureus (strain USA300) GN=nagD PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 3 
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y KL   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKLAIATLGVRN--GATFISTNPD-VSIPKERGLLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254
[Close]
BLAST of EY702386 vs. ExPASy Swiss-Prot
Match: NAGD_STAAB (Protein nagD homolog OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=nagD PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13
Identity = 51/144 (35.42%), Postives = 74/144 (51.39%), Query Frame = 3 
Query:   18 VVVGLDPHINYYKLQYGTLCIRENPGCLFIATNRDAVGHLTDLQEWPGAGCMVAAMCASTEKEPIVVGKPSTFMMEILSKKFQIASSRMCMVGDRLDTDILFGQNAGCKTLLVLSGVTTQSTLQDPSN-NIQPDYYTNQVSDIL 446
            VV+GLD  + Y K+   TL +R   G  FI+TN D V    +    PG G + + +  ST   P  +GKP   +M    +   +  S + MVGD  DTDI+ G N G  T+ V +GV   STL+D  N N+ P Y    +++ +
Sbjct:  117 VVIGLDEQVTYEKIAIATLGVRN--GATFISTNPD-VSIPKERGFLPGNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGV---STLEDVQNKNVPPTYSFKDLNEAI 254
The following BLAST results are available for this feature:
BLAST of EY702386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
NAGD_STAAC1.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAA81.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAA31.200e-1336.11Protein nagD homolog OS=Staphylococcus aureus (str... [more]
NAGD_STAAB2.047e-1335.42Protein nagD homolog OS=Staphylococcus aureus (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-D08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702386 ID=EY702386; Name=EY702386; organism=Citrus sinensis; type=EST; length=649bp
CCCGCGTCCGTGGAGCAGTTGTGGTTGGATTAGATCCGCATATTAACTAT
TACAAGCTTCAGTATGGAACCCTTTGCATCCGTGAGAATCCTGGCTGCCT
TTTTATTGCTACCAATCGTGATGCAGTGGGGCATTTGACTGATTTACAAG
AGTGGCCTGGTGCCGGGTGTATGGTTGCAGCCATGTGTGCATCAACTGAA
AAAGAGCCTATTGTAGTTGGAAAGCCATCAACGTTCATGATGGAAATTTT
GTCAAAGAAATTTCAGATTGCTTCCTCCAGAATGTGTATGGTGGGTGATA
GATTAGATACTGATATTTTGTTTGGACAAAATGCTGGCTGCAAAACACTC
CTTGTTCTTTCAGGTGTGACAACTCAATCCACCCTCCAAGATCCCTCAAA
CAACATCCAACCAGATTATTACACAAATCAGGTGTCTGACATTCTTGAAT
TATTAGGACAGTAACCTTGCGATTACTGCTTCAATACTCACTTATTTGAG
GCCTGTTTGCTGGTTGCCCCATGCAGATCTTATGTATGCCCATAGAATGC
TGATTGTTTGTATTGAACTCGCTTATATTGAAACATCAAAAAGCAATTCG
CGCTTAAAACTGCAACATTGCTTTTGCTTTTAAAAAAAAAAAAAAAAAA
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