EY688670

Overview
NameEY688670
Unique NameEY688670
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9921 contig Csv1_Contig9921:239..818. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A2_SCHPO (Eukaryotic translation initiation factor 5A-2 OS=Schizosaccharomyces pombe GN=tif51b PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 1
Query:   43 KLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 300
            K ED+ PS+HN D P V R +YQL++I +DG+++L+T  G TKDD+RLP  E L ++I++GF EGKDL++TV+S+MGEE   A +D
Sbjct:   70 KYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFEEGKDLIITVVSAMGEEIALACRD 153          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A1_SCHPO (Eukaryotic translation initiation factor 5A-1 OS=Schizosaccharomyces pombe GN=tif51a PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.206e-18
Identity = 45/86 (52.33%), Postives = 66/86 (76.74%), Query Frame = 1
Query:   43 KLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 300
            K ED+ PS+HN D P V R +YQL++I +DG+++L+T  G TKDD+RLP  E L ++I++GF EG+DL++TV+S+MGEE   A +D
Sbjct:   70 KYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFDEGRDLIITVVSAMGEETALACRD 153          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A_SPOFR (Eukaryotic translation initiation factor 5A OS=Spodoptera frugiperda GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18
Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 1
Query:   43 KLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 297
            K EDI PS+HN D PHV R DYQL DIS+DG+++L+ + G+ ++DL++P D +L +Q++  F  GK+L+ TV+ S GEE + A+K
Sbjct:   70 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A_SPOEX (Eukaryotic translation initiation factor 5A OS=Spodoptera exigua GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 2.882e-18
Identity = 42/85 (49.41%), Postives = 63/85 (74.12%), Query Frame = 1
Query:   43 KLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 297
            K EDI PS+HN D PHV R DYQL DIS+DG+++L+ + G+ ++DL++P D +L +Q++  F  GK+L+ TV+ S GEE + A+K
Sbjct:   70 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A_CANAL (Eukaryotic translation initiation factor 5A OS=Candida albicans GN=ANB1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.430e-17
Identity = 43/89 (48.31%), Postives = 68/89 (76.40%), Query Frame = 1
Query:   34 TRPKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 300
            T  KLED+ PS+HN + P+V+R ++QL+DI +DG++SL+T  G+TKDD+++P  E L  +++  F EGKDL+VT++S+MGEE   + K+
Sbjct:   65 TGKKLEDLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGE-LGDKLQSEFDEGKDLIVTIISAMGEEAAISYKE 151          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17
Identity = 44/89 (49.44%), Postives = 64/89 (71.91%), Query Frame = 1
Query:   34 TRPKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 300
            T  KLED+ PS+HN + P V R++YQL+DI +DG++SL+T  G TKDD++ P  E L   ++  F EGKDL+VT++S+MGEE   + K+
Sbjct:   66 TGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 9.270e-17
Identity = 44/89 (49.44%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   34 TRPKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALKD 300
            T  KLED+ PS+HN + P V R +YQL+DI +DGF+SL+   G+TKDD++ P  E L   ++  F EGKDL+VT++S+MGEE   + K+
Sbjct:   66 TGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 3.523e-16
Identity = 42/85 (49.41%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   43 KLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 297
            K EDI PS+HN D P+V R D QLI IS+D F++L+TE+G+ ++DL++P  E L  Q++  F  GKDL+ TV+ + GEE + A+K
Sbjct:   69 KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A2_PONAB (Eukaryotic translation initiation factor 5A-2 OS=Pongo abelii GN=EIF5A2 PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   34 TRPKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 297
            T  K EDI PS+HN D P++ R DYQLI I +DG++SLLTETG  ++DL+LP  E L  +I+  +  G+D+ V+VM +M EE   A+K
Sbjct:   65 TGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
BLAST of EY688670 vs. ExPASy Swiss-Prot
Match: IF5A2_MOUSE (Eukaryotic translation initiation factor 5A-2 OS=Mus musculus GN=Eif5a2 PE=2 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1
Query:   34 TRPKLEDIVPSSHNCDAPHVTRTDYQLIDISEDGFVSLLTETGNTKDDLRLPTDENLLSQIKDGFAEGKDLVVTVMSSMGEEQICALK 297
            T  K EDI PS+HN D P++ R DYQLI I +DG++SLLTETG  ++DL+LP  E L  +I+  +  G+D+ V+VM +M EE   A+K
Sbjct:   65 TGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
The following BLAST results are available for this feature:
BLAST of EY688670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
IF5A2_SCHPO1.294e-1853.49Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A1_SCHPO2.206e-1852.33Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A_SPOFR2.882e-1849.41Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A_SPOEX2.882e-1849.41Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A_CANAL1.430e-1748.31Eukaryotic translation initiation factor 5A OS=Can... [more]
IF5A1_YEAST5.435e-1749.44Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A2_YEAST9.270e-1749.44Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_DROME3.523e-1649.41Eukaryotic translation initiation factor 5A OS=Dro... [more]
IF5A2_PONAB1.339e-1550.00Eukaryotic translation initiation factor 5A-2 OS=P... [more]
IF5A2_MOUSE1.339e-1550.00Eukaryotic translation initiation factor 5A-2 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-091-A09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY688670 ID=EY688670; Name=EY688670; organism=Citrus sinensis; type=EST; length=580bp
CAGCTGCAGTACGGTCGGATTCCGGGTCGACCCACGCGTCCGAAGCTTGA
AGATATTGTGCCTTCCTCCCACAATTGTGATGCTCCCCATGTTACTCGCA
CTGACTATCAGCTGATTGATATATCCGAAGATGGTTTTGTGAGCCTTTTA
ACTGAAACCGGAAACACCAAGGATGATCTGAGGCTTCCTACCGATGAAAA
TCTGCTTAGCCAGATTAAAGATGGGTTTGCTGAAGGAAAAGACCTTGTGG
TGACCGTTATGTCGTCAATGGGAGAGGAGCAGATCTGTGCCCTTAAGGAC
ATTGGTCCTAAGAATTAACTATAATCCCATGGCATTAGCTTTGGCTGATA
GCAGGAGAACTCTTTCTTATGTTGCCAACATGGAGACTATCTACTATCCA
TGTCCACAACAAACTTCCATTAAGATAGTATTTTGGCTGTGTATTAAAAT
ATCGTCGTGCTTGTGATAAAGGAAGTGGAAAGAAAGCAGGTGTCGTCAAT
CTCCTGTTGAACGAAATTTATGTTGACAGCATCTCGGACTTATATATATT
TTACTATTTTATTAAAAAAAAAAAAAAAAA
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