EY702375

Overview
NameEY702375
Unique NameEY702375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.502e-26
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 515
            P   + +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA ALY  V    +  K
Sbjct:  101 PAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDVELK 262          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 7.802e-26
Identity = 69/171 (40.35%), Postives = 96/171 (56.14%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 515
            P   + +   RK+S+ +++FY++ QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W +HWI+WVGP +GA LA ALY  V    +  K
Sbjct:   98 PAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWANHWIYWVGPIMGAVLAGALYEYVFCPDVELK 259          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.019e-25
Identity = 68/171 (39.77%), Postives = 95/171 (55.56%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 515
            P   + +   RK+S+ +++FY+  QCLGAI GAG++         G L  G   V    T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    +  K
Sbjct:   98 PAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 62/164 (37.80%), Postives = 92/164 (56.10%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P   LG  L+ ++S+ +A+ Y++ QCLGA+    ++ G     +   L  G N ++ G + G GLG EI+ TF LV  V + TD +R      VP    L IG +V L HL  I  TG G+NPARS G+A++    + +  HWIFWVGP +G   AA+ +  ++
Sbjct:   81 PAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENNSL--GLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRRHDVSGSVP----LAIGLSVALGHLIAIDYTGCGMNPARSFGSAVL---TKNFTYHWIFWVGPMIGGAAAAIIYDFIL 235          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 67/161 (41.61%), Postives = 95/161 (59.01%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 485
            P   L L +  ++SL RA+FY+V Q +GAI GAG++ G       G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA +AA+ +
Sbjct:   70 PAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNLA--VNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAAVAAILY 221          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.127e-24
Identity = 67/164 (40.85%), Postives = 92/164 (56.10%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P   L   LA +LSL RAL YL+ Q LGA+ GAGV+ G   A   G L  G + +      G G   E++ T   +  VF++ D +   R    P  A LP+GF++ L HL  IP TG G+NPARS   A+I    R + +HW+FW GP +GA LAAL +++ +
Sbjct:   69 PAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTL--GLSALHPSVGPGQGTVVELLLTAQFILCVFASFDDRHDGR----PGSAALPVGFSLALGHLFGIPFTGAGMNPARSFAPAVI---TRNFTNHWVFWAGPLLGAALAALLYELAL 223          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.922e-24
Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 485
            P   L L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N +++  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:   70 PAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNLA--VNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAVLAAILY 221          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.510e-24
Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 485
            P   L L +  ++SL RA FY+  Q +GAI GAG++ G       G LA   N + +  T+G  +  E+I TF L   +F++TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:   70 PAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLA--VNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILY 221          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 3.278e-24
Identity = 65/171 (38.01%), Postives = 94/171 (54.97%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 515
            P   + +   R++S+ +++FY+  QCLGAI GAG++         G L  G   V    + G GL  E+I TF LV+T+F++ D+KR+     +     L IG +V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    +  K
Sbjct:   98 PAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGL--GVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSI----ALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVELK 259          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.592e-24
Identity = 66/161 (40.99%), Postives = 93/161 (57.76%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 485
            P   L L +  ++SL RA+FY+  Q +GAI GAG++         G LA   N + +  T G  +  E+I TF L   +FS+TD++R++     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N  R    HW+FWVGP VGA LAA+ +
Sbjct:   70 PAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNLA--VNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN--RFSPSHWVFWVGPIVGAMLAAILY 221          
The following BLAST results are available for this feature:
BLAST of EY702375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
AQP4_NOTAL3.502e-2640.35Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_MOUSE7.802e-2640.35Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.019e-2539.77Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
AQPA_RANES5.057e-2537.80Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP5_PIG5.057e-2541.61Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
MIP_CHICK1.127e-2440.85Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP5_MOUSE1.922e-2440.99Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
AQP5_HUMAN2.510e-2440.99Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
AQP4_BOVIN3.278e-2438.01Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP5_RAT5.592e-2440.99Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702375 ID=EY702375; Name=EY702375; organism=Citrus sinensis; type=EST; length=873bp
ATCAACCCTTCGCTGAACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTG
ACACGTGCACTTTTCTACCTGGTGATGCAGTGTCTGGGAGCCATCTGCGG
TGCTGGCGTTGTTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCG
CCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTT
GGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGC
CACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTC
CTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCA
ATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCAT
CTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGAC
CATTCGTTGGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGA
GCCATTCCCTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCA
CCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAAT
ATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTT
CTCTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAAG
AGAGTGGATGATGATGACGGATGGGCCCATGGTTAAGTANGTGGGCGCTG
TCACTTTGTACATTTGTATGCCTATGGATTTGTGCAATGTCATCTTGGGA
ATAATATGGACNAAACTAGTTCTATTNNAAAAAAAAAAAAAAAAAAAAAA
AAAGGCGGCCGCTCTAAAGATCC
back to top