EY702375

Overview
NameEY702375
Unique NameEY702375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.238e-19
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P       +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS   AI+    R + +HW++WVGP +G GL +L +  ++
Sbjct:   67 PAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 221          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: MIP_MOUSE (Lens fiber major intrinsic protein OS=Mus musculus GN=Mip PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.238e-19
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P       +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS   AI+    R + +HW++WVGP +G GL +L +  ++
Sbjct:   69 PAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRMGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFSNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.576e-18
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P       +  ++SL RA  Y+  Q LGA+ GA V+         G LA   N +  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ L HL  +  TG G+NPARS   AI+    R + +HW++WVGP +G GL +L +  ++
Sbjct:   69 PAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAVRGNLA--LNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGRLGSVA----LAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.058e-18
Identity = 60/169 (35.50%), Postives = 88/169 (52.07%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYG-RLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGL-AALY 482
            P    GL +  +      L Y++ Q +GAI  AGV+   + +G+ G  L+ G      A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FWV P +GA +  ALY
Sbjct:   65 PAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIY-LIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALQQLWLFWVAPLIGAAIGGALY 223          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.688e-18
Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 494
            P    G F+   ++L R + Y++ Q LG+I  + ++               ++V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:   86 PAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLV----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 236          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.511e-18
Identity = 58/167 (34.73%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   12 AELGLFLARKLSLTRALFYLVMQCLGAI-CGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA----EIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 494
            A  G F+   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV++ A D K+     ++ I+AP+ IGF V    L     TG  +NPA S G A++      W +HW++W GP +G G+A L ++V+
Sbjct:   87 AVFGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKG----NIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHWVYWAGPLIGGGIAGLVYEVL 235          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: AQP6_MOUSE (Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.821e-18
Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP-IGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P   L   +   +SL RA+ Y+  Q  GA  GA ++ G    G    L  G NVV +  + G  +  E++ T  LV  VF++ D +++       + +P   IG +V L HL  I  TG  +NPARS G A+I  K   +  HWIFWVGP  GA LA+L +  ++
Sbjct:   80 PAVTLAYLVGSHISLPRAMAYIAAQLAGATAGAALLYGVTPGGIRETL--GVNVVHNSTSTGQAVAVELVLTLQLVLCVFASMDGRQT-------LASPAAMIGTSVALGHLIGIYFTGCSMNPARSFGPAVIVGK---FAVHWIFWVGPLTGAVLASLIYNFIL 232          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.021e-17
Identity = 59/165 (35.76%), Postives = 85/165 (51.52%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 497
            P    G  L  +LSL RALFY + Q LGA+    +++   G  +    A     +A G      +  E   TF L+Y  ++   D KR     HV  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPFVGAGLA L ++ ++
Sbjct:   91 PAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFA-----LASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRG----HVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFVGAGLAGLLYEYLV 243          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 55/164 (33.54%), Postives = 86/164 (52.44%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 494
            P    G F+   ++L RA+ Y + Q LGA+    ++K   G      +   A  +++G T  + +  EI+ TF LVYTV++ A D K+      + I+APL IG  V    L      G  +NPA S G A++      W +HW++WVGPF+GA +AA+ +  +
Sbjct:   86 PAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGG-----METAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of EY702375 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.334e-17
Identity = 56/164 (34.15%), Postives = 86/164 (52.44%), Query Frame = 3
Query:    6 PFAELGLFLARKLSLTRALFYLVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 494
            P    G F+   +SL +AL Y V Q LG++    ++K   G    G  +  A V A      + +  E++ TF LVYTV++ A D K+      + ++AP+ IGF V    LA     G  +NPA S G A++      W++HW++WVGP  GA +AAL + ++
Sbjct:   86 PAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAM-----NAVVLEMVMTFGLVYTVYATAVDPKKG----DLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGV---WENHWVYWVGPLAGAAIAALVYDII 237          
The following BLAST results are available for this feature:
BLAST of EY702375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
MIP_RAT9.238e-1933.54Lens fiber major intrinsic protein (Fragment) OS=R... [more]
MIP_MOUSE9.238e-1933.54Lens fiber major intrinsic protein OS=Mus musculus... [more]
MIP_CANFA1.576e-1833.54Lens fiber major intrinsic protein OS=Canis famili... [more]
AQPZ_PSEPK2.058e-1835.50Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
TIP1_MEDTR2.688e-1832.74Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA3.511e-1834.73Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
AQP6_MOUSE7.821e-1835.76Aquaporin-6 OS=Mus musculus GN=Aqp6 PE=2 SV=1[more]
TIP31_ORYSJ1.021e-1735.76Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP13_ARATH1.334e-1733.54Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP12_MAIZE1.334e-1734.15Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702375 ID=EY702375; Name=EY702375; organism=Citrus sinensis; type=EST; length=873bp
ATCAACCCTTCGCTGAACTCGGCCTGTTCTTGGCGAGGAAGCTGTCGCTG
ACACGTGCACTTTTCTACCTGGTGATGCAGTGTCTGGGAGCCATCTGCGG
TGCTGGCGTTGTTAAGGGTTTCATGGGTGCCGGCCAATACGGGCGGCTCG
CCGGCGGTGCCAACGTCGTAGCTCATGGCTACACCAAGGGTGATGGTCTT
GGTGCCGAGATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGC
CACTGATGCCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTC
CTCTGCCAATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCA
ATTACCGGAACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCAT
CTACAACAAGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGAC
CATTCGTTGGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGA
GCCATTCCCTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCA
CCTGCATTTGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAAT
ATTAATTAGTCCTTTGTTCAAATCTGCTGGTGCTGGACCTGGGCCTGCTT
CTCTGTTTTCCTTCCTTAAAACGTTTTTTTTTTTTTTTTAATTTTGAAAG
AGAGTGGATGATGATGACGGATGGGCCCATGGTTAAGTANGTGGGCGCTG
TCACTTTGTACATTTGTATGCCTATGGATTTGTGCAATGTCATCTTGGGA
ATAATATGGACNAAACTAGTTCTATTNNAAAAAAAAAAAAAAAAAAAAAA
AAAGGCGGCCGCTCTAAAGATCC
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