EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BREBN (ATP synthase gamma chain OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=atpG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.262e-22
Identity = 72/216 (33.33%), Postives = 125/216 (57.87%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAV-KISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELI--ITELQKNPL--NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASA 649
            I+SD+GL GG N+  + K+  ++++ +   D+   +VI G K +      SK++  L+  +T L  +P   +  +++  A  + +N + D L + Y+KF S +S +PT+  +L  E      ES         YE    E   ++L   AE     ++++A+LE   SE+G+RM+AM +++ NA +M++RLTL+YNR RQA+IT E+ EI++GA+A
Sbjct:   82 ITSDRGLAGGYNANILRKVVNTINEKHKSKDEYGIFVI-GRKGRDFF---SKRNYPLLDEVTGLPTSPAFADIKKIAGAAVQMFENEQIDELYLCYNKFQSAISQIPTVKQLLPLEA----PESNNARAINYEYEPSSEEVLADLLPKYAE----TLVYSALLEAKASEEGSRMTAMGNATDNATDMINRLTLSYNRARQAAITQEISEIVAGANA 285          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_NOSP7 (ATP synthase gamma chain OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpG PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.261e-22
Identity = 74/238 (31.09%), Postives = 128/238 (53.78%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVL--SPELVE-------REAESGGKLGELDSYEIEGG-----------ETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  IS D+GLCGG N+  ++ +++  K         ++V++G K+     R  +  I+   + L++ P    + + +AD +L    + E D + +IY++F S+VS  P + T+L   P+ +E       R    GGK  E++  ++              +   +IL +L     S  +  A+ E+A SE  ARM+AM ++S NAGE+++ LTL+YN+ RQA+IT EL+E++ GA AL
Sbjct:   80 LLVISGDRGLCGGYNNNVIRRAENRAKEIKAEGLNYQFVLVGRKSTQYFQRRDQP-IDATYSGLEQIP-TAAEANQIADQLLSLFLSEEVDRIELIYTRFLSLVSSRPVVQTLLPLDPQGLEAADDEIFRLTTRGGKF-EVEREKVASQVRPLAPDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELINTLTLSYNKARQAAITQELLEVVGGAEAL 314          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_KLULA (ATP synthase subunit gamma, mitochondrial OS=Kluyveromyces lactis GN=ATP3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.261e-22
Identity = 69/220 (31.36%), Postives = 117/220 (53.18%), Query Frame = 2
Query:    2 ECIATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKN--VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            + I  I+SDKGLCG I+S   K  +   K     D     V +G+K K  L+R +  +++     + K    + + S++A+ IL+     +  + I ++   S +SF P+   V +   +E+             +EI+       + Q+L EF  S  +  A+ E   +E  AR +AMD++S+NAG+M++  ++ YNRTRQA IT EL++II+GAS+L+
Sbjct:   84 DLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNAD----VVAIGDKVKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNKPVFNAAAIEQSPS-------FSKFEIDADNN---VSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSLD 289          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_CAUSK (ATP synthase gamma chain OS=Caulobacter sp. (strain K31) GN=atpG PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.564e-22
Identity = 76/218 (34.86%), Postives = 111/218 (50.92%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            I   ++D+GL GG  S+ V+ ++   +      K+ K V +G+K+ A L R     I              T    +AD + +  E    D + + YS+F SVV   PT A  L P  V+         G    YE E  E   EIL+ L     +  + +A+L+N      ++M+AMD+++RNAG+M+ R TL YNR+RQA IT ELIEIISGA A+
Sbjct:   80 IIVAAADRGLAGGFTSSIVRAARERIETLIAQGKDVKIVCIGKKSTAQLRRLYSDRIVEDFDLSAYRQFTLTVAQPIADVVTRLYEAGDVDVVTLFYSRFKSVVIQTPT-ALQLIPATVDGANAPAAAQGAQAVYEYEPSEE--EILETLLPRNLTVQILSALLDNMAGFYASQMTAMDNATRNAGDMIKRYTLEYNRSRQAQITKELIEIISGAEAV 294          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_DICDI (ATP synthase subunit gamma, mitochondrial OS=Dictyostelium discoideum GN=atp5C1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 69/222 (31.08%), Postives = 116/222 (52.25%), Query Frame = 2
Query:    2 ECIATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS---YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            + +  I++D G+CG +N   +K  K+L  L     +E      G K  A +V D      +   +  K   ++ +V +  ++I+  V  +D+  ++Y+KF + +S+            V+R+   G  L EL+    YE    E +   +++L+EF  +  ++  + +N  SE  ARM AMD++S+N   +   L L YNR RQA IT+ELIEI+SGASA+E
Sbjct:   95 QLLIAITTDTGMCGPVNHQIIKTIKAL--LKDDAKQEILVSTTGLKGVAPIVADFPNQFLINGRDFGKADYSFPEVLLFLNEIISKVPNYDSALVVYNKFKNALSYS-----------VDRQFIPGFNLLELNRDKFYEYTTSEDRAATMKDLSEFYLASSLWTGLYQNRASEMAARMVAMDNASKNGESISQALGLQYNRARQAMITSELIEIVSGASAIE 303          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 7.267e-22
Identity = 73/241 (30.29%), Postives = 125/241 (51.87%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGE-----------------------ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  IS D+GLCGG N+  ++ +++  K       +  +VI+G KA+    R  ++ I+   T L++ P    + + +AD++L    + + D + ++Y++F S+VS  P + T+L  +    EA       E+      GG+ + E                       IL +L     S  +  A+ E+A SE  ARM+AM ++S NAGE++  L+L+YN+ RQA+IT EL+E++ GA AL
Sbjct:   80 LLVISGDRGLCGGYNTNVIRRAENRAKELKAEGLDYTFVIVGRKAEQYF-RRREQPIDASYTGLEQIP-TADEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQGLEAADD----EIFRLTTRGGQFQVERQTVTSQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELIKSLSLSYNKARQAAITQELLEVVGGAEAL 314          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_STACT (ATP synthase gamma chain OS=Staphylococcus carnosus (strain TM300) GN=atpG PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.492e-22
Identity = 72/216 (33.33%), Postives = 118/216 (54.63%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAV-KISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPL--NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            ISSD+GL G  N+  + K+ + + +    P  + K ++LG K      ++   ++E  + ++   P   +   V+  A D+ +N + D L I Y+KF +V+   PT   VL   L + +A SG  LG++ SYE E    K  IL  +       +++  +L    SE   RM+AM ++S NA +++D L+L YNR RQA+IT ++ EI+ GA+ALE
Sbjct:   80 ISSDRGLAGAYNANILRKVLQDIQERGENPS-DYKLLVLG-KVGIDFFKNRSIEVEYALPDVPDQPTFKSIEPVTKKAIDLYENGDIDELNIYYNKFINVLESKPTAKRVLP--LSKEDASSG--LGQMSSYEFE--PDKESILNIILPQYVEGLIYGTILNAKASEHAMRMTAMKNASDNASDLIDDLSLQYNRARQAAITQQITEIVGGATALE 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SYNAS (ATP synthase gamma chain OS=Syntrophus aciditrophicus (strain SB) GN=atpG PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 68/219 (31.05%), Postives = 115/219 (52.51%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQ-KNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++SSD+GLCGG NS+ +K ++   +       E     +G K +       K+   L+       +  + T    +A+D++    N E+D L +IY++F +V    P +  +L    V ++AE   +     +YE    E  G++L          ++F A+LE +  E GARM+AMD+++RN  EM+  LTL YN+ RQ++IT EL++I+ G  AL
Sbjct:   78 VVSMSSDRGLCGGFNSSLIKSTERFVREKIAEGLEVDLTPIGRKVREYF----KRKYALVSDRADVMSKFDMTLAVEIAEDVIDPFVNEEYDELYLIYNEFINVSMQRPAVVRLLPLPSVGQDAEIEAEKRIDYNYEPSDEELIGKLLP----MYIHVLIFRALLETSAGENGARMAAMDNATRNCDEMISTLTLQYNKVRQSAITAELMDIVGGTEAL 288          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_WOLTR (ATP synthase gamma chain OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=atpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.619e-21
Identity = 71/216 (32.87%), Postives = 121/216 (56.02%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVL----SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            I+SD+GLCG  NS+  K S+          K+   V LG+KA  I    ++ D + I+       +   +V  L D +  + ++D +++ Y+KF++  +  P + T+     S  L++ +  +   +     YE +  E    IL++L +      +++A+LE+A SE  ARM+AM+S++RN  EML++L L YN +RQA+ITT+LIE+I GA +L
Sbjct:   82 IASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLGKKAFDI--GKNRFDSKSILKIENSKGITLKRVEALVDSMDLS-KYDRIKVFYNKFYNTFTQKPMLETIKPWSKSSSLID-DYLTNSTIDYNYKYEPQNTEF---ILRSLIQNYVVTALYSALLESAASENSARMAAMESANRNTKEMLNKLALLYNCSRQAAITTDLIEVIGGAESL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.114e-21
Identity = 70/238 (29.41%), Postives = 127/238 (53.36%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILK---NVEFDALRIIYSKFHSVVSFLPTMATVLS---------PELVEREAESGGKLGELDSYEIEGG-----------ETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  ++ D+GLCGG N+  +K ++   K         K V++G KA     R +   I+   TEL + P + ++ S ++D++L    +   D + +IY++F S++S  P + T+L           + + R    GGK  +++  ++              +   +IL +L     +  +  A+ E+A SE  ARM+AM S+S NAGE++  L+L+YN+ RQA+IT E++E+++GA+AL
Sbjct:   80 VLVVTGDRGLCGGYNANVIKRTEQRIKELKSQGINYKLVLIGRKAVQYFERRNAP-IQTKYTELSQIP-SASEASTISDELLSLFLSETVDRVELIYTRFLSLISSKPVVQTLLPLTTKGLDTPDDEIFRLVTKGGKF-QVEREKVSASVSSFPQDMIFEQDPVQILDSLLPLYLNNQLLRALQESAASELAARMTAMSSASDNAGELIKTLSLSYNKARQAAITQEILEVVAGANAL 314          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_BREBN3.262e-2233.33ATP synthase gamma chain OS=Brevibacillus brevis (... [more]
ATPG_NOSP74.261e-2231.09ATP synthase gamma chain OS=Nostoc punctiforme (st... [more]
ATPG_KLULA4.261e-2231.36ATP synthase subunit gamma, mitochondrial OS=Kluyv... [more]
ATPG_CAUSK5.564e-2234.86ATP synthase gamma chain OS=Caulobacter sp. (strai... [more]
ATPG_DICDI7.267e-2231.08ATP synthase subunit gamma, mitochondrial OS=Dicty... [more]
ATPG_ANASP7.267e-2230.29ATP synthase gamma chain OS=Anabaena sp. (strain P... [more]
ATPG_STACT9.492e-2233.33ATP synthase gamma chain OS=Staphylococcus carnosu... [more]
ATPG_SYNAS1.240e-2131.05ATP synthase gamma chain OS=Syntrophus aciditrophi... [more]
ATPG_WOLTR1.619e-2132.87ATP synthase gamma chain OS=Wolbachia sp. subsp. B... [more]
ATPG_CYAP72.114e-2129.41ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
back to top