EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHIL3 (ATP synthase gamma chain OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 79/224 (35.27%), Postives = 119/224 (53.12%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K   +G+K         A  I+ R   +D++ +  E      N  Q+     ++    EFD   + YS+F SV+S +PT   ++       +AE     G +  YE +       IL++L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct:   81 LVVCTAERGLCGGFNSQIARFAREHVRKLVAEGKTVKIFTVGKKGYDILRREFASLIIERKELRDVKRVGFE------NADQIGKRIIEMYAAGEFDVCTLFYSEFKSVISQIPTAQRLIPASAEAVQAEDAEHAGAVYEYEPD----PASILEDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSU (ATP synthase gamma chain OS=Brucella suis GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S +PT A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUSI (ATP synthase gamma chain OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S +PT A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUO2 (ATP synthase gamma chain OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S +PT A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUC2 (ATP synthase gamma chain OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.786e-28
Identity = 79/218 (36.24%), Postives = 118/218 (54.13%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S +PT A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVPT-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SINMW (ATP synthase gamma chain OS=Sinorhizobium medicae (strain WSM419) GN=atpG PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.158e-27
Identity = 81/218 (37.16%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPL-NYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K + +G+K   IL R+    I   + + E++K    N  ++     ++  N EFD   + YS+F SV+S +PT   ++     E  AE    + E   YE +       IL +L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+++LTL YNR RQA IT ELIEIISGA AL
Sbjct:   81 LVVCTAERGLCGGFNSQIARHARDHVRKLLAQGKTVKIICVGKKGFDILRREFASLIIDRVDLREVKKIGFENADRIGHKVIELFDNGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEAVAEGASAIYE---YEPDAAA----ILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLNYNRQRQAQITKELIEIISGAEAL 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCA (ATP synthase gamma chain OS=Rhodobacter capsulatus GN=atpG PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.512e-27
Identity = 82/218 (37.61%), Postives = 122/218 (55.96%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  ++ ++GLCGG N+   K++K+         K  K + +G+K +  L RD  +     I       L+Y     ++ +I+   E   +D   I +S F SV+S +PT   V+ P   E +A S   +     Y+ E G+   EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+DRLT+ YNR+RQA+IT ELIEIISGA AL
Sbjct:   81 LVIMTGERGLCGGFNANIAKLAKAKAMELLAQGKTVKILTVGKKGRDALRRDLGQYYIDHIDLSDVKKLSYPVAQKISQNIIDRFEAGEYDVATIFFSVFQSVISQVPTAKQVI-PAQFETDAASASAV-----YDYEPGDQ--EILTALLPRAVATAIFAALLENNASFNGAQMSAMDNATRNAGDMIDRLTIEYNRSRQAAITKELIEIISGAEAL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSF (ATP synthase gamma chain OS=Geobacter sp. (strain FRC-32) GN=atpG PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.579e-27
Identity = 82/225 (36.44%), Postives = 121/225 (53.78%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSK--KDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVS---FLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K ++   K       +   + +G K    L    K  K+   + + L     NY   ++LA ++++     EFD + IIY+ F SV+S    L  +  V  PE  + E            YE    E  GE+L    E Q    +F ++LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct:   78 LIVVTSDRGLCGGFNANLCKAAERFVKERGAEFTDLSIMTIGRKGYEFLKNRQKIRKNFGTVFSNL-----NYQTAALLAQEVIQGYLDEEFDEVFIIYNAFRSVMSQDITLEQLLPVTPPEAADEE------YAPEYIYEPSKSELLGELLPKHIEVQ----IFKSLLESVASEHGARMTAMDSASKNANEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SPHWW (ATP synthase gamma chain OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=atpG PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.368e-27
Identity = 77/219 (35.16%), Postives = 124/219 (56.62%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKL-GELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   +S++GL G  N+  V+ ++          K  K+ ++G+K +A+L R     I   + +     + ++   ++A+D++      EFD   + ++KF S +   PT   ++   L    A++G    G   + E E  E    IL  L     +  +F A+LENA SEQG+RM+AMD+++RNAGEM+++LT+ YNRTRQA+ITTELIEII+GA AL
Sbjct:   81 LVVATSERGLAGAFNTNIVRAARKTADSLIAQGKTVKFYLIGKKGRAVLQRLFPGKIVHQVDQSHIKNVAFSDAHMVAEDLIGRYSAGEFDVAHLFFAKFQSALVQEPTELQIIPVPLT---ADTGAAATGASAAVEYEPDEEA--ILTELLPRNVAVQLFRAMLENAASEQGSRMTAMDNATRNAGEMINKLTIQYNRTRQAAITTELIEIIAGAEAL 294          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_AGRT5 (ATP synthase gamma chain OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=atpG PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.745e-27
Identity = 80/224 (35.71%), Postives = 120/224 (53.57%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEK---------AKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K + +G+K         A  I+ R   +D++ +  E      N  Q++     +    EFD   +IYS+F SV+S +PT   ++       EA    +  +   YE E       IL++L     S  +F A+LEN   E GA+MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARFARDQARKLISEGKTVKIITVGKKGYDSLRREFASLIIERIELRDVKKVGFE------NADQIAKKVISLFNAGEFDVCTLIYSEFKSVISQIPTGLQLIPAATPVVEA---AETTQTAVYEYE--PDAASILEDLIPRNISVQVFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 292          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_RHIL36.786e-2835.27ATP synthase gamma chain OS=Rhizobium leguminosaru... [more]
ATPG_BRUSU6.786e-2836.24ATP synthase gamma chain OS=Brucella suis GN=atpG ... [more]
ATPG_BRUSI6.786e-2836.24ATP synthase gamma chain OS=Brucella suis (strain ... [more]
ATPG_BRUO26.786e-2836.24ATP synthase gamma chain OS=Brucella ovis (strain ... [more]
ATPG_BRUC26.786e-2836.24ATP synthase gamma chain OS=Brucella canis (strain... [more]
ATPG_SINMW1.158e-2737.16ATP synthase gamma chain OS=Sinorhizobium medicae ... [more]
ATPG_RHOCA1.512e-2737.61ATP synthase gamma chain OS=Rhodobacter capsulatus... [more]
ATPG_GEOSF2.579e-2736.44ATP synthase gamma chain OS=Geobacter sp. (strain ... [more]
ATPG_SPHWW3.368e-2735.16ATP synthase gamma chain OS=Sphingomonas wittichii... [more]
ATPG_AGRT55.745e-2735.71ATP synthase gamma chain OS=Agrobacterium tumefaci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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