EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUA2 (ATP synthase gamma chain OS=Brucella abortus (strain 2308) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++ +GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S + T A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRUA1 (ATP synthase gamma chain OS=Brucella abortus (strain S19) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 78/218 (35.78%), Postives = 116/218 (53.21%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++ +GLCGG NS   ++++   +      K  K + +G+K   IL R+    +   +   +   L +     +   I+K  E   FD   + YS+F SV+S + T A  L P   + EAE       +  YE +       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAKRGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFSALLHDHVDLREVKQLAFVHADQIGHKIIKLFEEGAFDVCTLFYSEFKSVISQVST-AQQLIPASADNEAEMETAGDAIYEYEPD----PAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRAJA (ATP synthase gamma chain OS=Bradyrhizobium japonicum GN=atpG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.280e-26
Identity = 81/214 (37.85%), Postives = 113/214 (52.80%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          KE K+  +G K    L R   K I   +       L +     +A  +L   E   FD   + YS+F SV++ +PT   ++ P +VE      G      SYE E  E   EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERALALMAQGKEVKFFCVGRKGYEQLRRQFDKQIVEHLDLRSVRQLGFVNAEDIAKKVLARFEAGEFDVCTLFYSRFRSVIAQIPTAQQII-PLVVEE-----GTAASTTSYEYEPEED--EILTRLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAQITKELIEIISGAEAV 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_NITWN (ATP synthase gamma chain OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=atpG PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.672e-26
Identity = 83/214 (38.79%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS  V++++          KE K+  +G K    L R  +K I   +       L +     +A  +L      EFD   + YS+F SV++ +PT   V+ P  VE  A S G      SYE E  E   EIL  L     +  +F A+LEN  S  GA+M+AMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSAIVRLARDRAFALMNQGKEVKFFCVGRKGYEQLRRIFEKQIVETVELRTVRQLGFVNAEDIARKVLARFDAGEFDVCTLFYSRFQSVIAQVPTAQQVI-PLAVEDAARSDGPA---PSYEYEPEED--EILNGLLPRNLAVQIFRALLENNASFYGAQMTAMDNATRNAGEMIRKQTLIYNRTRQAMITKELIEIISGAEAV 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_OCHA4 (ATP synthase gamma chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26
Identity = 76/219 (34.70%), Postives = 119/219 (54.34%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYT---QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVE-REAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   ++++   +      K  K + +G+K   IL R+    I   +   +   L +    Q+     ++ +  EFD   + YS+F SV++ +PT   ++     +  +AE+ G       YE E       IL  L     S  +F A+LEN   E GA+MSAMD+++RNAG+M+++L++TYNR RQA IT ELIEIISGA AL
Sbjct:   80 LVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKIITVGKKGADILRREFASLIIDHVNLREVKQLAFVHADQIGHKVIELFEQGEFDVCTLFYSEFKSVIAQIPTAQQIIPASAGDVAQAETAGDA----IYEYE--PDPAAILSTLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_AGRRK (ATP synthase gamma chain OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.851e-26
Identity = 82/224 (36.61%), Postives = 122/224 (54.46%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLN---YTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVL---SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K   +G+K   IL R+      LII   +   +    +     L   I++  E   FD   + YS+F SV+S +PT   ++   +P +VE +A   G + E   YE +       IL +L     S  +F A+LEN   E G++MSAMD+++RNAGEM+++LTL+YNR RQA IT ELIEIISGA AL
Sbjct:   81 LVVCTAERGLCGGFNSQIARFARDHVRKLLAEGKTVKIFTVGKKGYDILRREYAS---LIIERKELRDVKRVGFENADALGKRIIEMFEAGEFDVCTLFYSEFKSVISQVPTGLQLIPASAPAVVEEDAAHKGAVYE---YEPDAAS----ILADLIPRNISVQIFRALLENVAGEMGSKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISGAEAL 294          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_XANP2 (ATP synthase gamma chain OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26
Identity = 76/214 (35.51%), Postives = 117/214 (54.67%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GLCG  N++ V++++   +   G  K+  +  +G K    L R     I  ++       L++   S +A  IL  ++   FD   + YS F SV+S +PT   ++      ++   GG +     YE E  E   +IL +L     +  +F A+LEN  S  G++MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA AL
Sbjct:   85 TGERGLCGAFNTSIVRLAREKAQQLIGEGKDVTFFCVGRKGYDQLRRTYPDRIIELVDLRSVRTLSFKNASDIASKILTLLDQGAFDVCTLFYSNFKSVISQIPTAQQIIPAVFEAQDEGEGGPV-----YEYEPAEE--DILADLLPRNIAVQIFRALLENQASFYGSQMSAMDNATRNAGDMIKKQTLIYNRTRQAMITKELIEIISGAEAL 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPS (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisB5) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26
Identity = 82/214 (38.32%), Postives = 115/214 (53.74%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDIL---KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          K  K+  +G K    L R   K I   I       L +     +A  ++    N EFD   + YS+F SV+S +PT A  L P +VE  A + G +     YE E    + EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERAYALMNQGKTVKFFCVGRKGYEQLRRTFDKQIIENIELRSVRQLGFVNAEDIAQKVIARFNNGEFDVCTLFYSRFKSVISQIPT-AQQLIPLVVE--APAAGSVATSYEYEPE----EDEILSTLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOP2 (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain HaA2) GN=atpG PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.724e-26
Identity = 86/218 (39.45%), Postives = 118/218 (54.13%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          KE K+  +G K    L R   K I   +       L +    V A+DI K V       EFD   + YS+F SV+S +PT A  L P +VE  A + G +     YE E    + EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERAYALMNQGKEVKFFCVGRKGYEQLRRTFDKQIIENLELRSVRQLGF----VNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPT-AQQLIPLVVE--APAAGSVATSYEYEPE----EDEILSTLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOP5 (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain BisA53) GN=atpG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.863e-26
Identity = 81/214 (37.85%), Postives = 115/214 (53.74%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          KE K   +G K    L R+  + I   I       L +     +A  ++      EFD   + YS+F SV+S +PT   ++ P +VE  A   G      SYE E  E   EIL +L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERAFALMNQGKEVKIFCVGRKGYEQLRRNFDRQIVENIELRSVRQLGFVNAEDIAAKVIARFDAGEFDVCTLFYSRFKSVISQIPTAQQII-PLVVEAPAAGAGPA---PSYEYEPEED--EILASLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGAEAI 292          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_BRUA21.280e-2635.78ATP synthase gamma chain OS=Brucella abortus (stra... [more]
ATPG_BRUA11.280e-2635.78ATP synthase gamma chain OS=Brucella abortus (stra... [more]
ATPG_BRAJA1.280e-2637.85ATP synthase gamma chain OS=Bradyrhizobium japonic... [more]
ATPG_NITWN1.672e-2638.79ATP synthase gamma chain OS=Nitrobacter winogradsk... [more]
ATPG_OCHA42.851e-2634.70ATP synthase gamma chain OS=Ochrobactrum anthropi ... [more]
ATPG_AGRRK2.851e-2636.61ATP synthase gamma chain OS=Agrobacterium radiobac... [more]
ATPG_XANP23.724e-2635.51ATP synthase gamma chain OS=Xanthobacter autotroph... [more]
ATPG_RHOPS3.724e-2638.32ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]
ATPG_RHOP23.724e-2639.45ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]
ATPG_RHOP54.863e-2637.85ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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