EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSL (ATP synthase gamma chain OS=Geobacter sulfurreducens GN=atpG PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.863e-26
Identity = 80/222 (36.04%), Postives = 122/222 (54.95%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSK--KDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K ++   K       E     +G K    L    K  K+   ++  L     +Y   ++LA ++++     E+D + I+++ F SV+S   T+  +L    +  EA S  +      YE   GE   E+L    E Q    +F A+LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct:   78 LIVVTSDRGLCGGFNANICKAAERFIKEKKAEFAEISVTTVGRKGYEFLKNRQKIHKNYGNVLANL-----SYPAAALLAQEMIEGYIAEEYDEVYILFNAFKSVMSQDITLEKLLP---IAPEAASTEEYAPEYIYEPSKGELLAELLPKHIEVQ----VFKALLESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRASB (ATP synthase gamma chain OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=atpG PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.352e-26
Identity = 85/220 (38.64%), Postives = 123/220 (55.91%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISK--SLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++  +L  +N G  K+ K+  +G K    L R  +K I   +       + +    V A+DI K V       EFD   + YS+F SV++ +PT   ++ P +VE  A +   +  L  YE E    + EIL  L        +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRQFEKQIIAHVDLRSVRQIGF----VHAEDIAKQVIARFDAGEFDVCTLFYSRFKSVIAQIPTAQQII-PLVVEAPAANAAPVA-LYEYEPE----EDEILSALLPRNVGVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAQITKELIEIISGAEAV 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SCHPO (ATP synthase subunit gamma, mitochondrial OS=Schizosaccharomyces pombe GN=atp3 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26
Identity = 71/213 (33.33%), Postives = 126/213 (59.15%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYV-ILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            SSDKGLCGGI+S+  ++ +   +L+     EN  + ILGEK +  L+R   +   L    +     ++ +   ++ +IL++  ++D + ++Y+KF S VSF   M  + + + +            L +YE+       E+ Q L EF F+  +F+A+ E  CSE  +R +AM+++S++AG+M+++ ++ YNR RQASIT ELI+I++GA++L
Sbjct:  102 SSDKGLCGGIHSSISRLIR--RELHDPKTFENTSLCILGEKVRTQLLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFASAVSFETVMKNLYTTKAINESPN-------LSAYEVSD-----EVHQPLMEFAFANAIFSAMAEAHCSEMSSRRNAMENASKSAGDMINKFSIQYNRQRQASITNELIDIVTGANSL 300          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BRASO (ATP synthase gamma chain OS=Bradyrhizobium sp. (strain ORS278) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.296e-26
Identity = 85/220 (38.64%), Postives = 123/220 (55.91%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISK--SLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++  +L  +N G  K+ K+  +G K    L R  +K I   +       + +    V A+DI K V       EFD   + YS+F SV++ +PT   ++ P +VE  A +   +  L  YE E    + EIL  L        +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRQFEKQIIAHVDLRSVRQIGF----VHAEDIAKQVIARFDAGEFDVCTLFYSRFKSVIAQIPTAQQII-PLVVEAPAANAAPVA-LYEYEPE----EDEILSALLPRNVGVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEIISGAEAV 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_NITHX (ATP synthase gamma chain OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.083e-25
Identity = 79/216 (36.57%), Postives = 118/216 (54.63%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISK--SLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++  +L  +N G  K+ K+  +G K    L R  +K I   +       L +     +A  ++      EFD   + YS+F SV++ +PT   ++  E+    A +G        YE E  E   EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERALALMNQG--KDVKFFCVGRKGYEQLRRTFEKQIVENVELRSVRQLGFVNAEAIAKKVIARFNAGEFDVCTLFYSRFKSVIAQVPTAQQIIPLEVEAPAANAG----PAPFYEYEPEED--EILTRLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLVYNRTRQAMITKELIEIISGAEAI 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOMG (ATP synthase gamma chain OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.083e-25
Identity = 78/222 (35.14%), Postives = 124/222 (55.86%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSK--KDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K ++   +       E     +G K    L    K  K+   +++ L     +Y   ++LA ++++     E+D + ++++ F SV+S   T+  +L P + E  AE       +  Y  E   +KGE+L  L        +F A+LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct:   78 LVVVTSDRGLCGGFNANICKAAERFIREKKAEFAEISVTTVGRKGFEFLKNRQKIHKNYGNVLSNL-----SYPTAALLAQEVVEGYVAEEYDEVYLLFNAFRSVMSQDITLQQLL-PIVPEETAEEE----YVPEYIYE--PSKGELLDELLPKHIEVQVFKALLESVASEHGARMTAMDSASKNATEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_AGRVS (ATP synthase gamma chain OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=atpG PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.415e-25
Identity = 78/224 (34.82%), Postives = 117/224 (52.23%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKA---------KAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCGG NS   + ++   +      K  K   +G+K            I+ R   ++++ +  E      N   V+     +    EFD   + YS+F SV+S +PT A  L P  V     +      +  YE +       IL +L     +  +F A+LENA  E GA+MSAMD+++RNAGEM+++LTL+YNR RQA ITTELIEII+GA AL
Sbjct:   81 LVVCTAERGLCGGFNSQISRFARDHVRSLLAAGKTVKIYCVGKKGYDSLRREFGALIVERTEFREVKRVAFE------NADTVARKVISMFDKGEFDVCTLFYSEFKSVISQIPT-ARQLIPAAVGDAPAASSSAAAIYDYEPDAAS----ILSDLIPRNIAVQIFRALLENAAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAKITTELIEIIAGAEAL 293          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BARBK (ATP synthase gamma chain OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpG PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.848e-25
Identity = 78/225 (34.67%), Postives = 123/225 (54.67%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKS-LHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEI------EGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCG  N+   ++++  + KL++   K  K + +G+K   IL+RD K  +   +       + + + + ++    D+     FD   + YS+F SV++  P MA  L P       E    + +  S E+      E       +L +L     S  +F A+LEN   E GA+MSAMD++SRNAGEM+++LT+TYNR RQA ITTELIEII+GA AL
Sbjct:   80 LVVCTAERGLCGAFNTQIARLAREHIQKLHAA-GKTVKILTVGKKGADILLRDFKSLMIDHVDLRSVKKIGFAEAAKISKQLIDLFNEGAFDVCTLFYSRFVSVITQRP-MALSLIPAGQNPVDEGQDFVDQAKSREVSQSAVYEYEPDVASLLNDLIPRHISVQIFQALLENVAGEMGAKMSAMDNASRNAGEMINKLTVTYNRQRQAQITTELIEIIAGAEAL 302          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPT (ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain TIE-1) GN=atpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25
Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          K  K+  +G K    L R+ +K I   +       + +    V A+DI K V       EFD   + YS+F SV+S +PT   ++  E+    A + G +     YE E    + EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERAYELMSQGKTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGF----VNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPTAQQLIPLEVT---APAAGTVATSYEYEPE----EDEILSGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEIISGAEAI 291          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_RHOPA (ATP synthase gamma chain OS=Rhodopseudomonas palustris GN=atpG PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.414e-25
Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV-------EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            + ++GL G  NS+ V++++          K  K+  +G K    L R+ +K I   +       + +    V A+DI K V       EFD   + YS+F SV+S +PT   ++  E+    A + G +     YE E    + EIL  L     +  +F A+LEN  S  GA+MSAMD+++RNAGEM+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TGERGLSGAFNSSIVRLARERAYELMSQGKTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGF----VNAEDIAKKVIARFNAGEFDVCTLFYSRFKSVISQIPTAQQLIPLEVT---APAAGTVATSYEYEPE----EDEILSGLLPRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEIISGAEAI 291          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_GEOSL4.863e-2636.04ATP synthase gamma chain OS=Geobacter sulfurreduce... [more]
ATPG_BRASB6.352e-2638.64ATP synthase gamma chain OS=Bradyrhizobium sp. (st... [more]
ATPG_SCHPO8.296e-2633.33ATP synthase subunit gamma, mitochondrial OS=Schiz... [more]
ATPG_BRASO8.296e-2638.64ATP synthase gamma chain OS=Bradyrhizobium sp. (st... [more]
ATPG_NITHX1.083e-2536.57ATP synthase gamma chain OS=Nitrobacter hamburgens... [more]
ATPG_GEOMG1.083e-2535.14ATP synthase gamma chain OS=Geobacter metallireduc... [more]
ATPG_AGRVS1.415e-2534.82ATP synthase gamma chain OS=Agrobacterium vitis (s... [more]
ATPG_BARBK1.848e-2534.67ATP synthase gamma chain OS=Bartonella bacilliform... [more]
ATPG_RHOPT2.414e-2537.16ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]
ATPG_RHOPA2.414e-2537.16ATP synthase gamma chain OS=Rhodopseudomonas palus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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