EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_YEAST (ATP synthase subunit gamma, mitochondrial OS=Saccharomyces cerevisiae GN=ATP3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 73/220 (33.18%), Postives = 126/220 (57.27%), Query Frame = 2
Query:    2 ECIATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            E I  I+SDKGLCG I+S   K  +    LN  P+ +   V +G+K K  L+R    +I+L I  + K+   + + +++AD +L  ++   +  + I Y+   S +SF P+   + + + +E+    G        +EI+   T   + ++L E+  +  M  A+ +   +E  AR +AMD++S+NAG+M++R ++ YNRTRQA IT EL++II+GAS+L
Sbjct:  105 ELIVAITSDKGLCGSIHSQLAKAVR--RHLNDQPNAD--IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFG-------KFEID---TDANVPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASSL 310          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_MARMM (ATP synthase gamma chain OS=Maricaulis maris (strain MCS10) GN=atpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 80/222 (36.04%), Postives = 121/222 (54.50%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQ----KNPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  +++D+GLCGG N+  VK ++          K+ K + +G+K    L R+      LI+ +++    K     T V +  D I    +N EFD   ++ ++F SV+S  P  A VL P +     + G +  +L     +    +  IL  L       V+ +A+LEN   E GA+M+AMD+++RNAGE++D+L L YNRTRQA ITTEL EIISGA AL
Sbjct:   81 LVVMTADRGLCGGFNTNIVKKARERINALKAEGKDVKVICVGKKGADQLKRNFAS---LIVDKMELSGEKTITGATSVRI-GDKIRHMFENGEFDVCELVSAEFVSVISQKPR-AKVLIPAI--DAIDEGVERPDLGGAVYDAEPDEETILNVLLPRYADTVILSALLENVAGEMGAKMAAMDNATRNAGELIDKLNLVYNRTRQAQITTELTEIISGAEAL 295          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BART1 (ATP synthase gamma chain OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 80/234 (34.19%), Postives = 124/234 (52.99%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNP---LNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPTM----------ATVLSPELVEREA---ESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCG  N    + ++   K      K  K + +G+K   IL RD K    L+I  +  +    + + +  V++    D+     FD   + YS+F SV++  PT           A V + ++VE++    +S   + E   YE E       +L+ L     S  +F A+LEN   E GA+M+AMD++SRNAGEM+++LT+ YNR RQA ITTELIEII+GA AL
Sbjct:   80 LVVCTAERGLCGAFNVQIARRAREQIKALLAAGKIVKIITVGKKGADILSRDYKS---LMIDHIDLHAVKRIGFAEALVISQRIVDLFNEGAFDVCTLFYSEFVSVINQRPTAFGLIPMGAPKAAVEATDVVEQKETSKDSQSIVHEAIVYEYE--PDAASLLEALVPRNLSVQIFRALLENVAGEMGAKMTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 308          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_AZOC5 (ATP synthase gamma chain OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpG PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.023e-25
Identity = 76/214 (35.51%), Postives = 113/214 (52.80%), Query Frame = 2
Query:   20 SSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +S++GLCG  N+  V+  +    L  G  K+ K+  +G K    L R     I  ++       L +     +A+ I+      EFD   + +S F SV+S +PT   ++     + E  S         Y+ E  E+  EIL +L     +  +F A+LEN  S  G++MSAMD+++RNAG+M+ + TL YNRTRQA IT ELIEIISGA A+
Sbjct:   85 TSERGLCGAFNTNIVRAVRERANLLIGQGKDVKFFCVGRKGYDQLRRLYPGQIVELVDLRSVRNLGFVNAHDIAEKIIDRFNKGEFDVCTLFFSHFKSVISQVPTAQQIIPATFEKAEGPSA-------VYDYEPEES--EILADLLPRNVAVQIFRALLENQASFYGSQMSAMDNATRNAGDMIKKQTLIYNRTRQAMITKELIEIISGAEAV 289          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOUR (ATP synthase gamma chain OS=Geobacter uraniireducens (strain Rf4) GN=atpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25
Identity = 76/221 (34.39%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSK--KDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +SSD+GLCGG N+   K ++   K       E   + +G K    L    K  K+   I        LNY   +++A +++      E+D + ++++ F SV++   T+  +L  +PE+   E  +   + E          +K  +L  L        MF A+LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISG+ +++G
Sbjct:   81 VSSDRGLCGGFNANICKAAERFAKERGSEFTELSMMTIGRKGYEFLKNRHKIYKNYANIF-----GTLNYQTAALIARELIDGYLAEEYDEVYLLFNAFKSVMTQDITLEQLLPVTPEVAAEEEYAPEYIYE---------PSKAALLDELLPKHIEVQMFKAMLESVASEHGARMTAMDSASKNASEMIGKLTLQYNRARQAAITTELMEIISGSESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOLS (ATP synthase gamma chain OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpG PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.172e-25
Identity = 76/220 (34.55%), Postives = 119/220 (54.09%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K  +   K       +   + +G K    L   S+  +      +   P NY   ++LA D+++     E+D + ++++ F +V+S   T   +L  E  E+ A     +  +  YE    +   EIL    E Q    +F A+LE+   E GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISGA +++G
Sbjct:   78 LIVVTSDRGLCGGFNTNLCKAGERYIKEKQAEFDQISIMTVGRKGYEFL--KSRHTVYKNFANMLSKP-NYQAAAMLAQDVIEGYLAEEYDQVVMLFNSFRTVMSQDITFQQLLPIEPEEKIAADENGVEYI--YEPSVSDLLTEILPKNIEVQ----IFKAMLESVAGEHGARMTAMDSASKNASEMIGKLTLQYNRARQAAITTELMEIISGAESIKG 288          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_PHEZH (ATP synthase gamma chain OS=Phenylobacterium zucineum (strain HLK1) GN=atpG PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.485e-24
Identity = 78/218 (35.78%), Postives = 120/218 (55.05%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIIT-ELQKNPLNYT--QVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   +SD+GL GG NS  V+ ++      S   K+ + + +G KA+  L R + +   L+ T E   NP      +VS    ++ +  E D + +++S F SVV+  PT+  ++  E+   +A    K     +YE E  E   +IL+ L     +  + +A LEN      A+M+AMD+++RNAG+M+  LTL YNR+RQA IT ELIEIISGA AL
Sbjct:   80 VVVATSDRGLAGGFNSAIVRAARERINALSAEGKDVRVITIGRKARDQLRRLAGE--RLVATYEAGSNPSLAVAEEVSARIQEMFEAGEVDVVHLVFSSFKSVVTQQPTVRQLIPAEVAAGQAPLDLKGA---TYEYEPDEE--QILETLLPRNVTTQLLSATLENQAGFYAAQMTAMDNATRNAGDMIASLTLQYNRSRQAQITKELIEIISGAEAL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_HYPNA (ATP synthase gamma chain OS=Hyphomonas neptunium (strain ATCC 15444) GN=atpG PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.324e-23
Identity = 69/221 (31.22%), Postives = 125/221 (56.56%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDI--ELIITELQKNPLNYTQVSVLADDIL----KNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  +++++GL GG N+   K+++   +      K  K + +G+K + +L R+        + +++++ N  N+T  S+    +L    +N EFD   +IYS+F +V+S +PT     + +L+   A  G  + +L   +     ++  +L+ L     +  + +A+LE++  EQ +RM+AMD+++RNA +++  L L YNR RQA IT ELIEIISGA AL
Sbjct:   79 LVVMTAERGLAGGFNAYVAKLARLKIQQLQSEGKTVKVLTIGKKGREVLAREHSALFTGHVNLSDVKSN--NFTDASLSVGQMLTKGFENGEFDVATLIYSQFKNVLSQVPT-----AQQLIPATAPEGAPVIDLGGAQYIYEPSEEALLEALLPRYINTQILSAMLESSAGEQASRMTAMDNATRNAKDLIKALNLKYNRARQAQITKELIEIISGAEAL 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_WOLPM (ATP synthase gamma chain OS=Wolbachia pipientis wMel GN=atpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.730e-23
Identity = 74/213 (34.74%), Postives = 117/213 (54.93%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGE-ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            I+SD+GLCG  NS+ VK S+     +    K+   V LG+KA    V  ++ D + I+       +    V  L D I  + ++D +++ YSKF++  +  P + T+  P   +         G    Y  E      E IL++L +      +++A+LE+A SE  ARM AM+S++RN  E+L++L L YNR+RQA+ITT+LIE+I GA +L
Sbjct:   82 IASDRGLCGNFNSSIVKFSQERVNKSIANGKKVDIVFLGKKA--FDVGKNRFDSKSILKIENSKGITLKHVEALVDGIDLS-KYDKVKVFYSKFYNTFTQKPMLETI-KPWSKDSSLIDSSLAGPTTDYGYEYEPQNIEFILKSLVQDYVVIALYSALLESATSENSARMVAMESANRNTKEILNKLALLYNRSRQAAITTDLIEVIGGAESL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GLUOX (ATP synthase gamma chain OS=Gluconobacter oxydans GN=atpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.730e-23
Identity = 71/218 (32.57%), Postives = 117/218 (53.67%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDI---LKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  ++SD+GL GG N+  V+ ++ L        K  + + +G K   ILVR   + I   +       + + + + +   I   L   E D   ++Y++F + ++ +P  A ++   + E +  +     +   YE E  E    +L  L        +F+A+LE+A  EQGARM+AMD++SRNA + +DRL+  YNRTRQA+IT +LIEIISGA A+
Sbjct:   83 VVVLTSDRGLAGGFNANIVRSARQLVDTLVSEGKTVRILPVGRKGADILVRHYPEMITDRLAGSDGKDVGFDKATDIGSRIATMLDAGEIDRCTLVYNRFLNAMTQIPVQAPLVPLSVPEND--NAAPDADTAQYEFEPDEAT--LLTQLLPRNLQVQIFSAMLESAAGEQGARMTAMDNASRNASKAIDRLSQKYNRTRQANITNDLIEIISGAEAV 296          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_YEAST7.023e-2533.18ATP synthase subunit gamma, mitochondrial OS=Sacch... [more]
ATPG_MARMM7.023e-2536.04ATP synthase gamma chain OS=Maricaulis maris (stra... [more]
ATPG_BART17.023e-2534.19ATP synthase gamma chain OS=Bartonella tribocorum ... [more]
ATPG_AZOC57.023e-2535.51ATP synthase gamma chain OS=Azorhizobium caulinoda... [more]
ATPG_GEOUR9.172e-2534.39ATP synthase gamma chain OS=Geobacter uraniireduce... [more]
ATPG_GEOLS9.172e-2534.55ATP synthase gamma chain OS=Geobacter lovleyi (str... [more]
ATPG_PHEZH3.485e-2435.78ATP synthase gamma chain OS=Phenylobacterium zucin... [more]
ATPG_HYPNA1.324e-2331.22ATP synthase gamma chain OS=Hyphomonas neptunium (... [more]
ATPG_WOLPM1.730e-2334.74ATP synthase gamma chain OS=Wolbachia pipientis wM... [more]
ATPG_GLUOX1.730e-2332.57ATP synthase gamma chain OS=Gluconobacter oxydans ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
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