EY702372

Overview
NameEY702372
Unique NameEY702372
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BARQU (ATP synthase gamma chain OS=Bartonella quintana GN=atpG PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.730e-23
Identity = 73/224 (32.59%), Postives = 117/224 (52.23%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPTMATVL---SPELVEREAESGGKLGE---LDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCG  N    + ++   K      K  K + +G+K   IL RD K  +   I       + + + ++++    D+     FD   + YS+F SV++  P    ++   SP+      +   K+ E   L S   +       +L+ L     S  +F A+LEN   E GA+++AMD++SRNAGEM+++LT+ YNR RQA ITTELIEII+GA AL
Sbjct:   80 LVVCTAERGLCGAFNMQIARRARQQIKALLSAGKIVKILTVGKKGADILSRDYKALMIDHIDLRSVKRVGFAEAAIISQKIIDLFDKDTFDVCTLFYSEFVSVINQRPVAFGLIPMGSPKGAVEAEDVTQKVDENKNLQSIVYDYEPDVASLLEELVPRNLSVQIFQALLENVAGEMGAKVTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 303          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOSM (ATP synthase gamma chain OS=Geobacter sp. (strain M21) GN=atpG PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.259e-23
Identity = 74/225 (32.89%), Postives = 122/225 (54.22%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL-----VRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K ++       G   E   + +G K    L     VR    +I         + L+Y   +++A ++++     ++D + +IY+ F SV++   T+  +L    V  +A    ++G    YE     +K  +L  L        +F ++LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISG+ +++G
Sbjct:   78 LVVVTSDRGLCGGFNANLSKAAERFINERKGEFSELSLMTIGRKGYEFLRNRHTVRKHHGNIF--------STLSYQTAALIAAELVEGYLAEDYDEVYVIYNAFKSVMTQDITLEQLLP---VTPKAGDDDEVGTEYIYE----PSKAALLDELLPKHIEVQVFKSLLESVASEHGARMTAMDSASKNATEMIGKLTLIYNRARQAAITTELMEIISGSESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_GEOBB (ATP synthase gamma chain OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.951e-23
Identity = 74/225 (32.89%), Postives = 121/225 (53.78%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL-----VRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +  ++SD+GLCGG N+   K ++       G   E   + +G K    L     VR    +I         + L+Y   +++A ++++     E+D + +IY+ F SV++   T+  +L    V  +     ++G    YE     +K  +L  L        +F ++LE+  SE GARM+AMDS+S+NA EM+ +LTL YNR RQA+ITTEL+EIISG+ +++G
Sbjct:   78 LVVVTSDRGLCGGFNANLSKAAERFINERKGDFSELSLMTIGRKGYEFLRNRHTVRKHHGNIF--------STLSYHTAALIAAELVEGYLAEEYDEVYVIYNAFKSVMTQDITLEQLLP---VTAKTADTDEVGTEYIYE----PSKAALLDELLPKHIEVQVFKSLLESVASEHGARMTAMDSASKNATEMIGKLTLIYNRARQAAITTELMEIISGSESIKG 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_DESAP (ATP synthase gamma chain OS=Desulforudis audaxviator (strain MP104C) GN=atpG PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.951e-23
Identity = 82/230 (35.65%), Postives = 129/230 (56.09%), Query Frame = 2
Query:    5 CIATISSDKGLCGGINSTAVKIS-KSLHKLNSGPDKENKYVILGEKAKAIL-VRDSKKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREA--ESGG------KLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            C   I++D+GLCGG NS  ++ + K L K      +E K V +G K +     RD ++D E I   L +N + + Q   +A  ++      E+DA+ ++YSKF +++   PT+  +L  E    EA  ++GG      K   +D Y  E   +  ++L  L        +++ ++E+  SEQ ARM AMD++++NAGEM+DRLTL  NR RQ  IT EL++I+ GA+ALE
Sbjct:   77 CYIVITADRGLCGGFNSNILRTAVKELSKW-----EEFKLVAVGRKCRNFFRFRDWERDAEFI--GLGEN-IRFEQGQQIARFVINKYIAGEYDAVYMVYSKFVNMLVQQPTVVKLLPVEPPAEEAAEKAGGEEAAAPKKATVD-YIFE--PSAADVLDYLLPRYVENSVYHGLIESKASEQSARMMAMDAATKNAGEMIDRLTLQMNRLRQEGITKELLDIVGGAAALE 295          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_BARHE (ATP synthase gamma chain OS=Bartonella henselae GN=atpG PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.854e-23
Identity = 74/224 (33.04%), Postives = 117/224 (52.23%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLAD---DILKNVEFDALRIIYSKFHSVVSFLPT---MATVLSPELVEREAESGGKL---GELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +   ++++GLCG  N    + ++   K      K  K + +G+K   IL RD K  +   I       + + + ++++    D+  +  FD   + YS+F SV++  P    +  ++S       AE   K+    +L S   +       +L  L     S  +F A+LEN   E GA+M+AMD++SRNAGEM+++LT+ YNR RQA ITTELIEII+GA AL
Sbjct:   80 LVVCTAERGLCGAFNVQIARRAREHIKTLLAAGKIVKVLTVGKKGADILSRDYKALMIDHIDLQSIKRVGFAEAAMISQKIVDLFDDDAFDVCTLFYSEFVSVINQRPVAFGLVPMVSSGGAVETAEVEQKIDNSADLQSIVYDYEPDAASLLDVLVPRNLSVQIFRALLENVAGEMGAKMTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 303          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_WOLPP (ATP synthase gamma chain OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 74/214 (34.58%), Postives = 122/214 (57.01%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKS-LHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGE-ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            I+SD+GLCG  NS+ VK S+  ++KL +  DK+   V  G+KA       ++ + + I+       +   +V  L  DI  + +++ +++ YSKF++     P + T+  P   +        +  L  Y  E      E IL++L +   +  +++A+LE+A SE  ARM AM+S++RN  EML++L L YNR+RQA+ITT+LIE+I GA +L
Sbjct:   82 IASDRGLCGSFNSSVVKFSQEHINKLIAN-DKKVDIVFFGKKA--FETGKNRFNSKNILKVENSKGITLKRVEALVSDIDLS-KYNKVKVFYSKFYNTFMQKPILETI-KPWSKDSLLIDNSVVSPLTDYSYEYEPQNIEFILKSLTQDYVTASLYSALLESAASENSARMVAMESANRNTKEMLNKLALLYNRSRQAAITTDLIEVIGGAESL 290          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_MAGSM (ATP synthase gamma chain OS=Magnetococcus sp. (strain MC-1) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.585e-23
Identity = 70/221 (31.67%), Postives = 124/221 (56.11%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSV-LADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALEG 658
            +   ++D+GLCG  NS  ++ +++          +     +G KA  +L R     +  + TE+ ++ +++  V   +  +++K+    +FDA  +++++F S +S   T A  + P+ ++ E  S         Y+ E  E   E+L+ L     +  +F A+ E+  SE G+RM+AMD++ RNAG+M+ +L   YNR+RQA+ITTELIEIISGA +L+G
Sbjct:   81 LVVYTADRGLCGSFNSVVIRATRARIAELEKQGFQVMLTFIGRKAYDVLKRSHGHLVRKVYTEMSRH-MSFAYVEKNIVKELIKDFHEGQFDACYLVFNQFKSAMSQELTWAQSI-PQPIDTEGAS-----TQTGYQFEPVEE--ELLEELLPRNLAVQVFQALAESEASEHGSRMTAMDNAVRNAGDMVKKLQTKYNRSRQAAITTELIEIISGAESLKG 292          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_SOLUE (ATP synthase gamma chain OS=Solibacter usitatus (strain Ellin6076) GN=atpG PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.464e-22
Identity = 74/218 (33.94%), Postives = 119/218 (54.59%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAIL-VRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS-YEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASALE 655
            +  I+ DKGL G  N+  +K +      +SG  ++  + ++G K +     R+     E I    +    +   ++  A ++ +N E DA+ ++Y++F SVVS   T++ VL  EL E+          +D  +E    +    +L    E +F    + A+LE+A SE  ARM+AMDS++ NA EM+D+LTL  NR RQASIT E+IE++SGA+A E
Sbjct:   82 LVVITGDKGLAGAFNTNLIKAASRFVAEHSG--EQITFELIGRKGRDYFRKREVAVSGEAIGLAAKVKYEDTAAIARRAMELFRNQEIDAVYLVYNEFKSVVSQKLTLSRVLPAELPEQA-------NPVDYIFEEPPADMLNILLPKYVEMEF----YRALLESAASEHAARMTAMDSATSNAAEMIDKLTLYMNRVRQASITKEIIEVVSGAAAAE 286          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_WOLWR (ATP synthase gamma chain OS=Wolbachia sp. subsp. Drosophila simulans (strain wRi) GN=atpG PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.912e-22
Identity = 74/213 (34.74%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   17 ISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGE-ILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            ++SD+GLCG  NS+ VK S++    N    K+   V LG+KA  I          L I   +   L + +  V   D+ K   +D +++ YSKF++  +  P + T+  P   +         G +  Y  E      E IL++L +      +++A+LE+A SE  ARM AM+S++RN  E+L++L L YNR+RQA+ITT+LIE+I GA +L
Sbjct:   82 VASDRGLCGNFNSSIVKFSQNKLITNG---KKVDIVFLGKKAFDIGKNRFDSKSILKIENSKGITLKHVEALVGGIDLSK---YDKVKVFYSKFYNTFTQKPMLETI-KPWSKDSSLIDNSLAGPITDYGYEYEPQNIEFILKSLVQDYVVIALYSALLESATSENSARMVAMESANRNTKEILNKLALLYNRSRQAAITTDLIEVIGGAESL 287          
BLAST of EY702372 vs. ExPASy Swiss-Prot
Match: ATPG_EHRCJ (ATP synthase gamma chain OS=Ehrlichia canis (strain Jake) GN=atpG PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.498e-22
Identity = 72/216 (33.33%), Postives = 119/216 (55.09%), Query Frame = 2
Query:    8 IATISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSKKDIELIITELQKNPLNYTQVSVLADDILKNVE-FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 652
            +  +SSD+GLCG  N+  VK +KS  +     +KE   +  G+KA  ++       I  ++ ++ K+  N+    +       N E FD + ++++KF+S +   P+     + EL+    E    L E+  YE     T  +++  ++      +M+ A LEN+ SE  +RM AM+S++RN  +ML++L L YNR+RQASITT+LIEIISG  +L
Sbjct:   75 LVIMSSDRGLCGNFNNLIVKFTKSYIEDLESDNKEVNLLFFGKKAYDMMYSQYSDKILNVLPDV-KSITNFLYFKLFVYSSGVNFEKFDNVIVLFNKFYSTILQKPS-----AQELIPCNVEMSVLLKEMYQYE----PTYIDVISTISLGYILNLMYIAFLENSASEHCSRMIAMESANRNTKDMLNKLALEYNRSRQASITTDLIEIISGFESL 280          
The following BLAST results are available for this feature:
BLAST of EY702372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_BARQU1.730e-2332.59ATP synthase gamma chain OS=Bartonella quintana GN... [more]
ATPG_GEOSM2.259e-2332.89ATP synthase gamma chain OS=Geobacter sp. (strain ... [more]
ATPG_GEOBB2.951e-2332.89ATP synthase gamma chain OS=Geobacter bemidjiensis... [more]
ATPG_DESAP2.951e-2335.65ATP synthase gamma chain OS=Desulforudis audaxviat... [more]
ATPG_BARHE3.854e-2333.04ATP synthase gamma chain OS=Bartonella henselae GN... [more]
ATPG_WOLPP8.585e-2334.58ATP synthase gamma chain OS=Wolbachia pipientis su... [more]
ATPG_MAGSM8.585e-2331.67ATP synthase gamma chain OS=Magnetococcus sp. (str... [more]
ATPG_SOLUE1.464e-2233.94ATP synthase gamma chain OS=Solibacter usitatus (s... [more]
ATPG_WOLWR1.912e-2234.74ATP synthase gamma chain OS=Wolbachia sp. subsp. D... [more]
ATPG_EHRCJ2.498e-2233.33ATP synthase gamma chain OS=Ehrlichia canis (strai... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-C06-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702372 ID=EY702372; Name=EY702372; organism=Citrus sinensis; type=EST; length=904bp
AGAATGTATTGCGACCATCTCTTCTGACAAAGGTCTATGTGGTGGAATTA
ACTCTACTGCAGTTAAGATAAGCAAGAGTTTGCACAAGTTGAATTCTGGT
CCCGACAAAGAAAACAAATACGTCATCTTGGGAGAGAAGGCAAAGGCAAT
ATTAGTACGTGACTCGAAGAAAGATATTGAACTCATCATAACTGAGTTAC
AGAAAAATCCTCTAAATTATACCCAGGTTTCCGTTCTTGCAGATGATATC
TTAAAGAATGTAGAATTTGATGCTTTGAGGATTATCTATAGCAAGTTCCA
TTCTGTGGTCTCCTTTCTGCCGACAATGGCAACTGTATTATCGCCTGAGC
TTGTGGAGAGAGAAGCCGAATCTGGGGGAAAGCTTGGTGAGCTAGACTCC
TATGAAATTGAAGGCGGTGAAACAAAGGGTGAAATACTTCAAAATCTGGC
TGAGTTCCAATTCTCTTGTGTCATGTTCAATGCGGTGTTGGAGAATGCTT
GCAGTGAGCAAGGGGCAAGGATGTCTGCCATGGATAGCTCAAGCAGAAAT
GCGGGAGAAATGCTTGATCGCCTCACTCTTACTTATAACAGAACTCGTCA
AGCATCTATCACCACCGAGTTGATTGAGATTATATCTGGAGCATCAGCAC
TGGAAGGCTGATTACAAAAGCGACAGTGCTCACTTTTCTTGACAGTGACG
AAATAATCCTTGGTGGANGGCTTGNTCAAACTTCATGTGGTACTTTCATA
AGAGTTTTTGTTGAGCTACTCCANNTATCTCTCCAGTGTCAAAACTTCTT
TTTGGGGAATTACANTTATACTTGCGATATTTTCCATATAGTTTTTGATC
CTCCATTATGTGCCTTTGCAGTGACATAAATGGCTTGGNTGTTGGGACTC
CCAG
back to top