CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_KLULA (Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyveromyces lactis GN=PCK1 PE=3 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.696e-62
Identity = 120/217 (55.30%), Postives = 149/217 (68.66%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPH-PKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSY-GCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEV-EGVPSEILDPENTWADKQA-YKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPIEYIP+AKIPC+  H PKN++LL CDA GVLPPVSKL   Q MYHFISGYT+ +AGTE G+ EP ATFS+CFG  F+ LHP KYA MLAEKM +H A  WL+NTGW+G SY   G R  L YTR I+DAIH GSL    Y+   +F ++IP  V + VP+ +L+P   WA+ +A Y   +  LA LF  NF+ +        +K TE++LAAGP
Sbjct:  332 AYPIEYIPSAKIPCLADHHPKNIVLLTCDASGVLPPVSKLTPDQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLSLHPMKYATMLAEKMAEHNANAWLINTGWTGSSYVAGGKRCPLKYTRAILDAIHDGSLAKEEYEVLPIFNLQIPKAVGDKVPASLLNPSKNWAEGEAKYTSNVKSLANLFVENFKTY-------QDKATEQVLAAGP 541          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_EMENI (Phosphoenolpyruvate carboxykinase [ATP] OS=Emericella nidulans GN=acuF PE=3 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.005e-62
Identity = 114/215 (53.02%), Postives = 149/215 (69.30%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGP-HPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSG-GSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPIEYI NAK+PC+   HP N+ILL CDA GVLPP+SKL   QTM+HFISGYT+ +AGTEDG+ EP ATFS+CF   F+ LHP +YA MLA+K+ +H A  WL+NTGW G G+   G R  L YTR I+DAIHSG L  A Y+  DVF + +P    GVP E+L+P+N+W    ++ + + KLA LF  NF+ +        ++ T+E++AAGP
Sbjct:  346 AYPIEYIENAKVPCLSDSHPSNIILLTCDARGVLPPISKLTTEQTMFHFISGYTSKMAGTEDGVTEPQATFSSCFAQPFLALHPMRYARMLADKISQHKANAWLLNTGWVGAGATTGGKRCPLKYTRAILDAIHSGELAKAEYETYDVFNLHVPKSCPGVPDELLNPKNSWTATTSFSDEVNKLAKLFNENFQKYA-------DQATKEVIAAGP 553          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA2_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salinibacter ruber (strain DSM 13855) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.843e-62
Identity = 120/213 (56.34%), Postives = 146/213 (68.54%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YP++YI  AKIP +G HP N+I L  DAFGV+PPVSKL   Q MYHFISGYTA VAGTE G+ EP ATFSACFGAAF++  P KYA MLAEK++ H A  WLVNTG +GG YG G R+ L +TR +IDAIH GSLL+A  K   VFG+++PTE   VP++IL P  TW D QAY E    L GLF  +FE +       +++    I  AGP
Sbjct:  320 SYPLDYIDRAKIPGMGGHPDNIIFLTYDAFGVMPPVSKLTPEQAMYHFISGYTAKVAGTEVGVDEPQATFSACFGAAFLVWPPDKYAEMLAEKIRAHDAEAWLVNTGITGGPYGVGHRVPLEHTRAMIDAIHDGSLLDAPKKTEPVFGLDVPTECPNVPNDILMPRETWDDPQAYDEKAEHLVGLFHDHFEKY-------EDEAAPAIAEAGP 525          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_GEOMG (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pckA PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.892e-61
Identity = 107/196 (54.59%), Postives = 141/196 (71.94%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            +YPI +IPN     +G HP N+I+L CDAFGVLPP+++L   Q MYHF+SGYTA VAGTE GI EP A FSACFGA F+ LHP+ YA +L EK+ +HG + WLVNTGWSGG YG GSR+K+ Y+R +++A   G+L   ++ K   FG++IPT   GVP+E+L+P+NTW DK  Y ET   L   F++NFE + +Y
Sbjct:  326 SYPITHIPNIVKSGMGGHPTNIIMLTCDAFGVLPPIARLTPDQAMYHFLSGYTAKVAGTEAGITEPQAAFSACFGAPFMALHPSVYAKLLGEKIARHGVSCWLVNTGWSGGPYGVGSRMKIAYSRALVNAAIDGTLNAGSFVKDQFFGLDIPTGCSGVPAEVLNPKNTWVDKTKYDETATMLVERFRKNFEQYRSY 521          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_GRAFK (Phosphoenolpyruvate carboxykinase [ATP] OS=Gramella forsetii (strain KT0803) GN=pckA PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.523e-60
Identity = 111/213 (52.11%), Postives = 143/213 (67.14%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N + P  G +PKN+  L  DAFGVLPP+SKL   Q  YHFISGYTA VAGTE G+ EP  +FSACFGA F+ LHPT+YA ML++KM+      WLVNTGW+GG YG GSR+KL YTR++I +   G L N +Y+K ++FG+E+P   EGVPSE+L+P NTW D+ AY     +L+  F++NF  F  Y         EEI+   P
Sbjct:  325 SYPINHINNIQKPSTGENPKNIFFLTADAFGVLPPISKLTPGQAAYHFISGYTAKVAGTEAGVDEPVPSFSACFGAPFMPLHPTEYAEMLSKKMKAADVNVWLVNTGWTGGPYGVGSRMKLKYTREMISSALEGKLENVDYEKHNIFGLEMPKTCEGVPSEVLNPRNTWKDQNAYDLKAKELSNFFRKNFRKFEEY-------ANEEIMNGAP 530          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_NITSB (Phosphoenolpyruvate carboxykinase [ATP] OS=Nitratiruptor sp. (strain SB155-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.304e-60
Identity = 114/196 (58.16%), Postives = 137/196 (69.90%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            +YPI +I   K    GPHPKN+I L+ DAFGVLPPVSKL   Q MY+F+SGYTA VAGTE GI EP ATFSACFG AF+ LHPT YA +L EK+ KHG   +LVNTGW+GG YG G R+ LP TR  I+AI +GS+  + Y+   +F +EIPT VEGV   IL+P NTW DK+AY   L  LA LF  NF+ +  Y
Sbjct:  318 SYPIYHICKHKEDLQGPHPKNIIFLSADAFGVLPPVSKLTKEQAMYYFLSGYTAKVAGTERGITEPVATFSACFGEAFLPLHPTVYAKLLGEKIDKHGVNVYLVNTGWTGGPYGIGQRMSLPATRSCINAILNGSITQSEYEILPIFNLEIPTYVEGVDPAILNPRNTWEDKEAYDRQLEHLAKLFIDNFKRYEGY 513          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIN (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans GN=pckA PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.341e-60
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = -1
Query:  237 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 809
            +YPI +I N ++P  G HPK +I L  DAFGVLPPVSKL++ Q MYHF+SGYTA VAGTE GIKEPTATFSACFGAAF+ LHPTKYA +L EKM+KH    +L+NTG  GGSYG G R+ LP TRKIID I +G++  + +    VF V  P  + GV S ILDP   W DK AY +T  KL  +F +NF+
Sbjct:  322 SYPIFHINNIQVPSKGGHPKTIIFLTYDAFGVLPPVSKLSIEQAMYHFLSGYTAKVAGTERGIKEPTATFSACFGAAFMTLHPTKYAKLLGEKMKKHNVRAYLMNTGLVGGSYGVGKRMNLPSTRKIIDEILNGNIEKSEFVTHPVFQVAYPKTISGVDSAILDPREAWTDKAAYDQTAKKLGEMFIKNFK 512          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_LEPIC (Phosphoenolpyruvate carboxykinase [ATP] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=pckA PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 7.341e-60
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = -1
Query:  237 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 809
            +YPI +I N ++P  G HPK +I L  DAFGVLPPVSKL++ Q MYHF+SGYTA VAGTE GIKEPTATFSACFGAAF+ LHPTKYA +L EKM+KH    +L+NTG  GGSYG G R+ LP TRKIID I +G++  + +    VF V  P  + GV S ILDP   W DK AY +T  KL  +F +NF+
Sbjct:  322 SYPIFHINNIQVPSKGGHPKTIIFLTYDAFGVLPPVSKLSIEQAMYHFLSGYTAKVAGTERGIKEPTATFSACFGAAFMTLHPTKYAKLLGEKMKKHNVRAYLMNTGLVGGSYGVGKRMNLPSTRKIIDEILNGNIEKSEFVTHPVFQVAYPKTISGVDSAILDPREAWTDKAAYDQTAKKLGEMFIKNFK 512          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_GEOUR (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter uraniireducens (strain Rf4) GN=pckA PE=3 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.635e-59
Identity = 106/193 (54.92%), Postives = 136/193 (70.47%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            +YPI +IPN     +G HP NVI+L CDAFGVLPP+++L   Q MYHF+SGYTA VAGTE GI EP ATFS CFGA F+ LHP+ YA +L  K+ +H    WLVNTGWSGG+YG GSR+K+ Y+R +++A   G+L    ++K  VFG++IP    GVP E+L+P N WADK AY  T   L  +F++NFE F
Sbjct:  326 SYPITHIPNIVPSGMGGHPTNVIMLTCDAFGVLPPIARLTPEQAMYHFLSGYTAKVAGTEAGITEPQATFSTCFGAPFMALHPSVYAELLKAKIARHKVNCWLVNTGWSGGAYGVGSRMKIGYSRALVNAALDGTLAAGQFEKDSVFGLDIPRACPGVPGEVLNPRNVWADKAAYDATAKDLVEMFRKNFEQF 518          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CAMLR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=pckA PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.136e-59
Identity = 111/204 (54.41%), Postives = 144/204 (70.59%), Query Frame = -1
Query:  198 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKL 809
            +YPIE+I N +      HP N+I L+ DAFGVLPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK+ KH    +LVNTGWSGG+YG G R+ +  TR  I+AI  GS+ N  ++  D+F + +P E+ GV S++L+P NTW DK+AY+ET LKLA +F  NF+ + + K G + KL
Sbjct:  316 SYPIEHILNHEPSLSAGHPSNIIFLSADAFGVLPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPVATFSACFGEVFLPLHPTVYAKLLGEKISKHNVNVYLVNTGWSGGAYGVGKRMSIKATRACINAILDGSIQNCEFENYDLFNLAVPKELAGVESKLLNPINTWEDKKAYEETKLKLAKMFIENFKRYEDVKEGAEFKL 519          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_KLULA2.696e-6255.30Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyver... [more]
PCKA_EMENI6.005e-6253.02Phosphoenolpyruvate carboxykinase [ATP] OS=Emerice... [more]
PCKA2_SALRD7.843e-6256.34Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salin... [more]
PCKA_GEOMG3.892e-6154.59Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_GRAFK2.523e-6052.11Phosphoenolpyruvate carboxykinase [ATP] OS=Gramell... [more]
PCKA_NITSB4.304e-6058.16Phosphoenolpyruvate carboxykinase [ATP] OS=Nitrati... [more]
PCKA_LEPIN7.341e-6058.64Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_LEPIC7.341e-6058.64Phosphoenolpyruvate carboxykinase [ATP] OS=Leptosp... [more]
PCKA_GEOUR1.635e-5954.92Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_CAMLR2.136e-5954.41Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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