CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_AGRT5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pckA PE=3 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.751e-53
Identity = 100/211 (47.39%), Postives = 131/211 (62.09%), Query Frame = -1
Query:  177 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAA 809
            AYP+ +IPNA    +  HPK +I+L  DAFGVLPP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + KHG   WLVNTGW+GG+YG G R+ +  TR ++ A  +G L NA ++    FG  +P  ++GV   ILDP +TWAD  AY     KL  +F  NF  F ++   K       +L A
Sbjct:  324 AYPLHFIPNASETGIAGHPKTIIMLTADAFGVLPPIARLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPAEYGNLLRELIGKHGVDCWLVNTGWTGGAYGIGKRMPIKATRALLTAALTGDLKNAQFRTDANFGFAVPLSLDGVDGAILDPRSTWADGAAYDAQAKKLVSMFVSNFTKFEDHVDSKVRDAAPGLLLA 534          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_AGRRK (Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.751e-53
Identity = 100/199 (50.25%), Postives = 131/199 (65.83%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+++IPNA    +  HP+ +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HPT+Y  +L E + +HGA  WLVNTGW+GG+YG G R+ +  TR ++ A   G L  A ++    FG  +P  VEGV S ILDP +TWAD QAY     KL  +F  NF  F ++  G
Sbjct:  324 AYPLDFIPNASESGMTGHPETIIMLTADAFGVMPPIARLTPEQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPTEYGNLLKELIARHGAGCWLVNTGWTGGAYGTGRRMPIKATRALLAAALKGDLDKAEFRIDPNFGFAVPVAVEGVDSAILDPRSTWADGQAYDAQAAKLVQMFVSNFAKFEDHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_STACT (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus carnosus (strain TM300) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.287e-53
Identity = 97/203 (47.78%), Postives = 132/203 (65.02%), Query Frame = -1
Query:  201 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNK 809
            AYPI+YI N   P    HP  ++ L  DAFGVLPP+SKL   Q +YHF+SG+T+ +AGTE GI EP  +FS CFGA F+ L+P +YA +L + + KH    +LVNTGW+GG YG G RI L YTR+++DA   G L NA ++K +VFG+ +P +++ VP  IL P N W+++ AY+E    L   F  NF+     K G D+K
Sbjct:  323 AYPIDYIDNIAKPSKAAHPNTILFLTADAFGVLPPISKLTKEQALYHFLSGFTSKLAGTERGITEPVPSFSTCFGAPFLPLNPKRYAELLGQLIDKHEVEVYLVNTGWTGGKYGVGRRISLKYTRRMVDAAIKGELKNAEFEKDEVFGLSVPKDIKDVPKSILQPINAWSNQDAYREQAQDLISRFVENFK-----KFGDDSK 520          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACHD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus halodurans GN=pckA PE=3 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.902e-53
Identity = 106/214 (49.53%), Postives = 132/214 (61.68%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AY +E IPN+ IP V  HP  +I L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE G+  P ATFS CFGA F+ L   +YA ML EK+ ++    +LVNTGWSGG YG G R+KL YTR ++ A   G L         VFG+ IPT   GVP  +L P NTW DK+ Y +   +LA  F  NF+ FTN        ++E I  AGP+
Sbjct:  321 AYSLEAIPNSVIPSVAGHPNTIIFLTADAFGVLPPISKLTPEQAMYHFLSGYTSKLAGTERGVTSPEATFSTCFGAPFLPLPAARYAEMLGEKIAQYEVQVFLVNTGWSGGPYGVGQRMKLSYTRAMVQAALQGELNTVETITDSVFGLHIPTRCPGVPDFVLQPRNTWDDKEKYDKKAQELAKQFIENFKRFTN--------VSEAIQKAGPS 526          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHISN (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium sp. (strain NGR234) GN=pckA PE=3 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.096e-53
Identity = 97/199 (48.74%), Postives = 131/199 (65.83%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+++IPNA      P P+ +I+L  DAFGVLPP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + ++G T WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++    FG  +P  V GV   ILDP +TW+D QAY     +L  +F  NF  F ++  G
Sbjct:  324 AYPLDFIPNASETGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAYGTGSRMPIKVTRALLSAALDGSLNSAAFRTDANFGFAVPVSVPGVDDRILDPRSTWSDGQAYDAQARRLVDMFIANFAKFESHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_METNO (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=pckA PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.096e-53
Identity = 97/193 (50.26%), Postives = 128/193 (66.32%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+ +IPNA       HPKN+++L CDAFGVLPP++KL  A+ MYHF+SGYTA VAGTE G+K P ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG  G G R+ +  TR+++ A   GSL  A++++   FG  +PT V GV   IL P  TW DK A+ ET  KL  +F+ NF+ F
Sbjct:  325 AYPLPFIPNASPTGRAGHPKNIVMLTCDAFGVLPPIAKLTGAEAMYHFLSGYTAKVAGTEKGLKGPEATFSTCFGAPFMPRHPSVYGNLLRDLIARHHVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLTAALDGSLAKADFRRDPYFGFAVPTSVPGVEPHILYPVKTWQDKAAFAETAKKLVEMFQANFKRF 517          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA1_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salinibacter ruber (strain DSM 13855) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.096e-53
Identity = 103/214 (48.13%), Postives = 135/214 (63.08%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            +YP+ YIPN      G HP +V+ L  DAFGVLPPVS+L+ AQ MYHF+SGYTA VAGTE G+ EP ATFS CFG  F++  P+ YA +L +K+++H    WLVNTG +GG YG G RI+L +TR ++DAI  G+L      +  VFG+ IP  V GVP  +L P  TW D QAY +   +L   F  NFE +         ++  E+ AAGP+
Sbjct:  323 SYPLHYIPNTSSDGRGGHPDHVLFLTYDAFGVLPPVSELSPAQAMYHFLSGYTAKVAGTEAGVNEPKATFSTCFGEPFMVRDPSVYAELLGQKIRRHDTDCWLVNTGMTGGPYGVGHRIELDHTRAMVDAILDGTLGTVARTRDPVFGLSIPDRVPGVPDSVLTPRQTWGDPQAYDQHARELVDAFADNFETYV-------EQVGTEVRAAGPS 529          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACSK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus clausii (strain KSM-K16) GN=pckA PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.655e-53
Identity = 100/193 (51.81%), Postives = 126/193 (65.28%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+E IPNA +P V   PK +I L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE GI +P ATFS CFGA F+   P +YA ML +K++      +LVNTGW+GGSYG G+RIKL YTR +++A   G L         +FG+ +PT   GVP E+L P   W D+ AY+ T L+LA  F  NF  F
Sbjct:  320 AYPLEAIPNALLPSVAGPPKAIIFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGITQPEATFSTCFGAPFLPRKPEEYATMLGDKLENDDVQVFLVNTGWTGGSYGTGTRIKLAYTRAMVEAALQGKLDEIETVCDPIFGLYVPTHCPGVPDELLTPRRVWKDEAAYEATALQLAKQFHENFSAF 512          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_METPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=pckA PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.692e-53
Identity = 94/210 (44.76%), Postives = 135/210 (64.29%), Query Frame = -1
Query:  180 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILA 809
            AYP+++I NA       HPKN+++L CDAFGV+PP+++L  A+ MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L   M +HG   WLVNTGW+GG  G G R+ +  TR+++ A   GSL    +++   FG  +P EV GV +++L P  TW +K A+ ET  +L  +F+ NF+ F ++ +  D +  E + A
Sbjct:  327 AYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIARLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRALMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQTEFRRDPYFGFSVPVEVAGVETQVLSPVETWTNKAAFAETATRLVTMFRENFKRFESH-VDADVRAAEPVAA 535          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SULDN (Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.483e-52
Identity = 96/191 (50.26%), Postives = 132/191 (69.11%), Query Frame = -1
Query:  237 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 809
            +YPIE+I N +      HP+N+I L+ DAFG+LPPVSKL   Q MY+F+SGYTA VAGTE GI +P ATFS+CFG AF+ LHPT YA +L EK+ KH    +LVNTGW+GG+YG G+R+ +  TR  I+AI  GS+  + +  T  F +++P  +  +  EIL+P N W+DK+A+ +T   LA +F  NF+
Sbjct:  318 SYPIEHIKNHETSLSAGHPENIIFLSADAFGILPPVSKLTREQAMYYFLSGYTAKVAGTERGITKPVATFSSCFGEAFLPLHPTVYAKLLGEKIDKHDVHVYLVNTGWTGGAYGVGTRMSIKDTRACINAILDGSIKESEFDTTKTFKLQVPKTLGNINPEILNPRNAWSDKEAFDKTTDMLANMFNENFK 508          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_AGRT51.751e-5347.39Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_AGRRK1.751e-5350.25Phosphoenolpyruvate carboxykinase [ATP] OS=Agrobac... [more]
PCKA_STACT2.287e-5347.78Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_BACHD3.902e-5349.53Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_RHISN5.096e-5348.74Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_METNO5.096e-5350.26Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA1_SALRD5.096e-5348.13Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Salin... [more]
PCKA_BACSK6.655e-5351.81Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_METPB8.692e-5344.76Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_SULDN1.483e-5250.26Phosphoenolpyruvate carboxykinase [ATP] OS=Sulfuri... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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