CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHIME (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium meliloti GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.483e-52
Identity = 97/199 (48.74%), Postives = 130/199 (65.33%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+ +IPNA      P P+ +I+L  DAFGVLPP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + ++G T WLVNTGW+GG++G GSR+ +  TR ++ A   GSL NA+++    FG  +P  V GV + ILDP +TWAD  AY     +L  +F  NF  F  +  G
Sbjct:  324 AYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGSRMPIKVTRALLSAALDGSLNNASFRTDANFGFAVPVSVPGVEAGILDPRSTWADGVAYDTQARRLVDMFIANFAKFERHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.483e-52
Identity = 98/199 (49.25%), Postives = 126/199 (63.32%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+++IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  SG L    ++    FG  +P  V GV   ILDP +TWADK AY     KL  +F  NF  F N+  G
Sbjct:  324 AYPMDFIPNASKTGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLVNTGWTGGAYGTGKRMPIKATRALLAAALSGELGQVEFRADTNFGFAVPVSVHGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFENHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHILW (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pckA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.303e-52
Identity = 97/199 (48.74%), Postives = 126/199 (63.32%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+++IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  +G L    ++    FG  +P  V GV S ILDP +TWADK AY     KL  +F  NF  F  +  G
Sbjct:  324 AYPMDFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRALLAAALTGELGQVEFRADTNFGFAVPVSVNGVDSSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFEGHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus pumilus (strain SAFR-032) GN=pckA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.303e-52
Identity = 96/195 (49.23%), Postives = 127/195 (65.13%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYPIE I N   P +  HP  ++ L  DAFGVLPP+S+L   Q MYHF+SGYT+ +AGTE G+  P  TFS CFG+ F+ L    YA ML +K+ +HGA  +LVNTGW+GG YG G R+ L +TR ++ A   G L NA     D+FG+ IP  + GVP E+L P  TW D++AY+E    LA  FK+NF+ F++
Sbjct:  321 AYPIEMIDNIVKPSIAGHPSAIVFLTADAFGVLPPISRLTKEQAMYHFLSGYTSKLAGTERGVTSPETTFSTCFGSPFLPLPAHVYAEMLGKKIDEHGAKVFLVNTGWTGGGYGTGKRMNLAHTRAMVQAAIEGDLDNAEMITDDIFGLHIPLHIPGVPDEVLQPSKTWDDQEAYQEKAHFLANEFKKNFQKFSH 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACLD (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=pckA PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.303e-52
Identity = 96/195 (49.23%), Postives = 125/195 (64.10%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYPI+ I N   P +  HP+ ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE GI  P ATFS CFG+ F+ L    YA ML  K+ +HG   +LVNTGW+GG YG G R+ L YTR ++ A   G L  A  +   +FG+  P  V GVP ++LDP  TW D+  Y+E  + LA  FK+NF+ F+N
Sbjct:  321 AYPIDAIDNIVKPSIAAHPQTIVFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGITTPEATFSTCFGSPFLPLPAHVYAEMLGRKIDEHGVGVFLVNTGWTGGGYGTGERMSLAYTRAMVQAAIEGELDKAEMRTDRIFGLHSPVHVPGVPDQVLDPAKTWTDENEYEEKAIHLAKAFKQNFKKFSN 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_STAHJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.314e-52
Identity = 96/193 (49.74%), Postives = 125/193 (64.77%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYPI +I N  +P    HP  +I L  DAFGVLPP++KL  +Q MYHF+SG+T+ +AGTE G+ EP  +FS CFGA F+ L+P KYA +L E + KH    +LVNTGW+GG YG G RI L YTR ++D    G L NA + K + FG+ IPTE+E VP  IL+P N W+D   Y+     L   F+ NF+ F
Sbjct:  323 AYPIHHIDNIVLPSKAAHPNTIIFLTADAFGVLPPIAKLTKSQAMYHFLSGFTSKLAGTERGVTEPEPSFSTCFGAPFLPLNPNKYADLLGELIDKHDVDVYLVNTGWTGGKYGVGRRISLHYTRYMVDQAIKGKLKNAEFTKDEKFGLSIPTEMEDVPKTILNPINAWSDSDKYRAQADDLIQRFEENFKKF 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_EUBR3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.314e-52
Identity = 114/214 (53.27%), Postives = 140/214 (65.42%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVG-PHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P    P  KNVI L+ DAFGVLPPVS L   QT Y+F+SG+TA +AGTE GI EPT TFSACFG AF+ LHPTKYAA L +KM+K GA  +LVNTGW+    G G RI +  TR IIDAI SG +LNA  KK  +F  E+PTE+ GV S ILDP +T+AD   ++     LA  F +NF  +T  + GK       ++AAGP
Sbjct:  329 SYPINHITNIVKPVSSAPAAKNVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLVNTGWN----GTGKRITIKDTRGIIDAILSGDILNAPTKKIPMFDFEVPTELPGVDSGILDPRDTYADASEWEAKAKDLAERFNKNFVKYTTNEAGK------ALVAAGP 532          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BREBN (Phosphoenolpyruvate carboxykinase [ATP] OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.314e-52
Identity = 95/191 (49.74%), Postives = 125/191 (65.45%), Query Frame = -1
Query:  237 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 809
            AYP+E IP A IP VG  P  ++ L  D+FGVLPP+SKLN  Q MYHF+SGYT+ +AGTE G+  P   FS CFG+ F+ LHP  YA ML +K+ +     +LVNTGW+GG  G G R+KL YTR ++ A  +G L   +Y   ++FGV++PT    VP+E+L P NTWA+K+ Y +    LA  F  NFE
Sbjct:  320 AYPVEAIPGAVIPGVGGQPNVIVFLTADSFGVLPPISKLNKEQAMYHFLSGYTSKMAGTERGVTAPQTEFSTCFGSPFLPLHPVVYAEMLGKKIDERKVQVYLVNTGWTGGPVGVGQRMKLSYTRAMVTAALNGELEKVDYVADEIFGVQVPTSCPNVPAEVLQPRNTWANKEDYDKQAADLAARFIENFE 510          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHIEC (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.634e-52
Identity = 97/199 (48.74%), Postives = 126/199 (63.32%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+ +IPNA       HPK +I+L  DAFGV+PP+++L   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +  TR ++ A  SG L    ++    FG  +P  V+GV   ILDP +TWADK AY     KL  +F  NF  F ++  G
Sbjct:  324 AYPMHFIPNASETGRAGHPKTIIMLTADAFGVMPPIARLTPDQAMYHFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELISRHGVECWLVNTGWTGGAYGTGKRMPIKATRGLLAAALSGKLGQLQFRTDTNFGFAVPVSVDGVDGSILDPRSTWADKAAYDAQAEKLVSMFIANFAKFEDHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_PARDP (Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoccus denitrificans (strain Pd 1222) GN=pckA PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 7.358e-52
Identity = 98/201 (48.76%), Postives = 129/201 (64.18%), Query Frame = -1
Query:  207 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKD 809
            AYP+E I NA    +G  P+NVI+L CDA+GVLPP+++L  AQ MYHF+SG+T+   GTE G+ EPT TFS CFGA F+   P  Y  +L EK+ K GA  WLVNTGW+GG++G G R+ +  TR ++ A   GSL +A ++K   FG E+P  V GV  ++LDP  TW D  AY     KL G+F  NF  + + KI  D
Sbjct:  326 AYPLEQISNASETSLGGQPRNVIMLTCDAYGVLPPIARLTPAQAMYHFLSGFTSKTPGTEVGVTEPTPTFSTCFGAPFMPRRPEVYGKLLQEKIAKTGAACWLVNTGWTGGAFGTGKRMPIKATRALLTAALDGSLNDAQFRKDPNFGFEVPVSVPGVEDKLLDPRQTWTDGAAYDAQARKLVGMFSDNFAQYAD-KIDDD 525          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_RHIME1.483e-5248.74Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHIL31.483e-5249.25Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHILW3.303e-5248.74Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_BACP23.303e-5249.23Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACLD3.303e-5249.23Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_STAHJ4.314e-5249.74Phosphoenolpyruvate carboxykinase [ATP] OS=Staphyl... [more]
PCKA_EUBR34.314e-5253.27Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_BREBN4.314e-5249.74Phosphoenolpyruvate carboxykinase [ATP] OS=Breviba... [more]
PCKA_RHIEC5.634e-5248.74Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_PARDP7.358e-5248.76Phosphoenolpyruvate carboxykinase [ATP] OS=Paracoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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