CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACFR (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis GN=pckA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.062e-50
Identity = 112/214 (52.34%), Postives = 137/214 (64.02%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P   GPH K VI L+ DAFGVLPPVS LN  Q  Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  K    F   +PTE+ GV  +ILDP +T+AD   + E    LAG F +NF  FT  + GK      +++AAGP
Sbjct:  330 SYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYADPAQWNEKAKDLAGRFIKNFAKFTGNEAGK------KLVAAGP 533
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACFN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=pckA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.062e-50
Identity = 112/214 (52.34%), Postives = 137/214 (64.02%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P   GPH K VI L+ DAFGVLPPVS LN  Q  Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA  L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  K    F   +PTE+ GV  +ILDP +T+AD   + E    LAG F +NF  FT  + GK      +++AAGP
Sbjct:  330 SYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILNPEQAQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYAEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSIDKAPTKVIPFFDFVVPTELPGVDPKILDPRDTYADPAQWNEKAKDLAGRFIKNFAKFTGNEAGK------KLVAAGP 533
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_PARD8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.388e-50
Identity = 111/214 (51.87%), Postives = 136/214 (63.55%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P   GPH K VI L+ DAFGVLPPVS L   QT Y+F+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKY   L +KM+  GA  +LVNTGW+G     G RI +  TR IIDAI  GS+  A  KK   F  E+PT + GV  +ILDP +T+AD   + E    LA  F++NF  FT  + GK       ++AAGP
Sbjct:  330 SYPIYHIENIVKPVSKGPHAKQVIFLSADAFGVLPPVSILTPEQTQYYFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTKYGEELVKKMEMTGAKAYLVNTGWNGS----GKRISIKDTRGIIDAILDGSINEAPTKKIPYFDFEVPTALPGVDPKILDPRDTYADPAQWDEKAKDLAARFQKNFAKFTGNEAGK------ALVAAGP 533
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_OCEIH (Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanobacillus iheyensis GN=pckA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.388e-50
Identity = 101/213 (47.42%), Postives = 132/213 (61.97%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYP+E I N   P V  HP  +I L  DA G LPP+SKL   Q MYHF+SGYT+ +AGTE G+ EP ATFSACFG+ F+ L P+KYA ML +K+       +L+NTGW+GGSYG G RIKL +TR ++ +   G L +      ++FG++IP  V GVP E+L P+ TW +K+AY +    LA  F  NF+ FT          +E I  AGP
Sbjct:  319 AYPLENIDNIINPSVAGHPNTIIFLTADASGTLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTEPLATFSACFGSPFLPLAPSKYAEMLGKKIDMFDTNVFLINTGWTGGSYGVGDRIKLSFTRAMVHSALEGELNSIETITDEIFGLQIPAHVPGVPDELLVPKQTWGNKEAYMKEAQTLALKFHENFKKFT--------LASETIKQAGP 523
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALTI (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella typhi GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALSV (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella schwarzengrund (strain CVM19633) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALPK (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A (strain AKU_12601) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALPC (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi C (strain RKS4594) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALPB (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
[Close]
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SALPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Salmonella paratyphi A GN=pckA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.812e-50
Identity = 109/214 (50.93%), Postives = 139/214 (64.95%), Query Frame = -1 
Query:  171 AYPIEYIPNAKIPCV-GPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N   P     H   VI L  DAFGVLPPVS+L   QT YHF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +  TR IIDAI +GSL NA   +  +F + IPTE+ GV + ILDP NT+A  + ++E    LA LF  NFE +T+   G      E +++AGP
Sbjct:  334 SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISIKDTRAIIDAILNGSLDNAETFRLPLFDLAIPTELPGVDTHILDPRNTYASPEQWQEKATALAKLFIENFEKYTDTPAG------EALVSAGP 537
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACFR1.062e-5052.34Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_BACFN1.062e-5052.34Phosphoenolpyruvate carboxykinase [ATP] OS=Bactero... [more]
PCKA_PARD81.388e-5051.87Phosphoenolpyruvate carboxykinase [ATP] OS=Parabac... [more]
PCKA_OCEIH1.388e-5047.42Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanob... [more]
PCKA_SALTI1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALSV1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPK1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPC1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPB1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]
PCKA_SALPA1.812e-5050.93Phosphoenolpyruvate carboxykinase [ATP] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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