CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.084e-58
Identity = 108/213 (50.70%), Postives = 141/213 (66.20%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYP+++IPNA IP +G HP+ V+ L  DAFGV+PP++KL   Q MYHF+SGYT+ +AGTE GI +P ATFS CFGA F+   P  YA +L E++ KHGA+ +LVNTGW+GG  G G R+ LPYTR ++ A   G L    +    VFG+ +PT   GVP+E+L+P +TW DK+ Y     KLAGLF  NF  F +        + EEI AAGP
Sbjct:  319 AYPVDFIPNAVIPGIGGHPRTVVFLTADAFGVMPPIAKLTREQAMYHFLSGYTSKLAGTERGITDPQATFSTCFGAPFLPRSPRVYADLLGERIAKHGASVYLVNTGWTGGPSGIGRRMSLPYTRAMVRAAIKGELEGVEFVPDPVFGILVPTSCPGVPAEVLNPRHTWQDKEKYDAMARKLAGLFAENFTKFRD--------VPEEIRAAGP 523          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.028e-58
Identity = 107/195 (54.87%), Postives = 132/195 (67.69%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYPI+YI N   P V  HPK +I L  DAFGVLPP+SKL   Q MYHF+SG+T+ +AGTE G+ EP   FS CFG+ F+ L  T YA ML +K+ +HGA  +LVNTGW+GG YG GSR+KL YTR ++ A   G L N    +  VFG+ IPT VEGVPS++L+P   WADK AY     +LAGLF  NF+ F N
Sbjct:  321 AYPIQYIENIVDPSVAGHPKTIIFLTADAFGVLPPISKLTKEQAMYHFLSGFTSKLAGTERGVTEPEPVFSTCFGSPFLPLPATVYAEMLGQKIDEHGAQVYLVNTGWTGGEYGTGSRMKLSYTRTMVRAAIDGKLTNVETTQDAVFGLHIPTAVEGVPSQVLNPREAWADKAAYDAKAAELAGLFNENFKKFAN 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_PELPD (Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobacter propionicus (strain DSM 2379) GN=pckA PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.531e-57
Identity = 99/196 (50.51%), Postives = 135/196 (68.88%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            +YP+ +IPN     +  HP N+I+L CDA+GVLPP+S L   Q MYHF+SGYTA VAGTE G+KEPTATFS CFG  F+ L+PT Y  +L EK+ +H  + WLVNTGW+GG YG G RI++ Y+R +I+A   G+L + +++    FG+ IPT   GVPSE+L+P NTW+D   Y +T  +L  +F+ NF  +  Y
Sbjct:  326 SYPLTHIPNIVPSGIAGHPANIIMLTCDAYGVLPPISHLTKEQAMYHFLSGYTARVAGTEAGVKEPTATFSTCFGGPFMALNPTVYGELLREKISRHNVSCWLVNTGWNGGPYGVGERIRISYSRALINAALDGTLADGSFETDPFFGLAIPTSCPGVPSEMLNPRNTWSDPARYDDTASRLVAMFRSNFTKYQPY 521          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJJ (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.999e-57
Identity = 109/199 (54.77%), Postives = 139/199 (69.85%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  316 SYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYAETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJ8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=pckA PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.999e-57
Identity = 109/199 (54.77%), Postives = 139/199 (69.85%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY ET  KLA +F +NF+ + + K G
Sbjct:  316 SYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSIAKCEFENFEVFNLAIPKALEGVESTLLNPINTWLDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SILPO (Phosphoenolpyruvate carboxykinase [ATP] OS=Silicibacter pomeroyi GN=pckA PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.611e-57
Identity = 101/196 (51.53%), Postives = 135/196 (68.88%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            AYP+EYI NA +  +G HPKN+I+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L +K+ +HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A  +GSL NA ++K   FG ++P  V GV   +LDP  TW D+ A+ +   KL  +F  NFE +  Y
Sbjct:  326 AYPLEYISNASVSALGGHPKNIIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGNLLRDKIARHGATCWLVNTGWTGGAYGVGSRMPIKATRALLTAALNGSLNNAEFRKDGNFGFDVPVSVPGVAEVLLDPRRTWDDQGAFDKQAAKLVQMFADNFEQYVPY 521          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=pckA PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.454e-57
Identity = 104/196 (53.06%), Postives = 131/196 (66.84%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            AYP+EYI NA    +G HPKNVI+L CDAFGVLPP+++L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+   GAT WLVNTGW+GG+YG G R+ +  TR ++ A   GSL N  ++K   FG E+PTE+ GV S +LDP +TWAD  AY     KL  +F  NF  +  Y
Sbjct:  326 AYPLEYISNASATGMGGHPKNVIMLTCDAFGVLPPIARLTPAQAMYHFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKITSLGATCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLANVTFRKDPNFGFEVPTELHGVDSSLLDPRSTWADPAAYDAQAKKLVEMFANNFAQYVPY 521          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJD (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=pckA PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.597e-57
Identity = 108/199 (54.27%), Postives = 140/199 (70.35%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++K+    +LVNTGWSGGSYG G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW+DK AY ET  KLA +F +NF+ + + K G
Sbjct:  316 SYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKYEVNVYLVNTGWSGGSYGVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESTLLNPINTWSDKNAYTETRDKLAHMFVQNFKRYEDVKEG 514          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACWK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus weihenstephanensis (strain KBAB4) GN=pckA PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.922e-57
Identity = 105/193 (54.40%), Postives = 131/193 (67.88%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L  A   K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  321 AYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKAETAKHDIFGLEVPRHVPGVPDEVLMPEQTWADKDAYKVKAIELANEFKENFKKF 513          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 110/213 (51.64%), Postives = 138/213 (64.79%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPI++IP A    +G HPK +I L  DAFGVLPP++KL   Q MY+F+SGYT+ +AGTE GI EP ATFS CFGA F+ L P  YA ML EK++K+    +LVNTGWSGG YG G RI L YTRK++ A   G L    + K  +F + IP    GVPSEIL+P NTW DK+ Y +T  +LA  F  NF+        K  +++EEI  AGP
Sbjct:  315 AYPIDFIPGAVQSGIGGHPKTIIFLTADAFGVLPPIAKLTKEQAMYYFLSGYTSKLAGTERGITEPQATFSTCFGAPFLPLPPMVYAKMLGEKIEKYDTKVFLVNTGWSGGPYGIGKRINLEYTRKMVSAALKGELDKVEFTKDPIFNLNIPASCPGVPSEILNPRNTWKDKEEYDKTAKRLAQRFIENFQ--------KYKEVSEEIKNAGP 519          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA2_MOOTA3.084e-5850.70Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_LYSSC4.028e-5854.87Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_PELPD1.531e-5750.51Phosphoenolpyruvate carboxykinase [ATP] OS=Pelobac... [more]
PCKA_CAMJJ1.999e-5754.77Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_CAMJ81.999e-5754.77Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_SILPO2.611e-5751.53Phosphoenolpyruvate carboxykinase [ATP] OS=Silicib... [more]
PCKA_RHOS54.454e-5753.06Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_CAMJD7.597e-5754.27Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_BACWK9.922e-5754.40Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_THETN1.296e-5651.64Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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