CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_FLAJ1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 110/213 (51.64%), Postives = 135/213 (63.38%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            +YPI +I N +   +G +PKN+  L  D+FG+LPP+SKL   Q  YHFISGYTA VAGTE G+ EP   FSACFGA F+ LHPTKYA ML++KM+      WL+NTGW+GG+YG GSR+KL YTR +I A  +G L N  Y    VFG+  P     VPSEIL+P NTW DK  Y +  L+LA  FK NF  F  +          EILA  P
Sbjct:  326 SYPITHIDNIQPGSIGHNPKNIFFLTADSFGILPPISKLTPGQAAYHFISGYTAKVAGTEAGVTEPQPNFSACFGAPFMPLHPTKYAEMLSKKMKDADVKVWLINTGWTGGAYGTGSRMKLKYTRAMITAALNGELDNVEYVNHKVFGIAKPQSCPNVPSEILNPRNTWEDKDLYDKKALELAQKFKANFAKFEEF-------ANAEILAGAP 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_DINSH (Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoroseobacter shibae (strain DFL 12) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 102/196 (52.04%), Postives = 130/196 (66.33%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            AYP+ YI NA    +G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P  V GV + +LDP  TW D  AY     KL  +F  NF  +  Y
Sbjct:  326 AYPLNYISNASETALGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGSRMPIKATRALLTAALDGSLADATFRKDANFGFDVPVTVHGVDATLLDPRGTWEDSAAYDAQAQKLVEMFAENFAQYVPY 521          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYPI  I N      G HPKN++ L  DAFGVLPP+S+L   QTMY FISG+TA + GTE G+ EP  TFS CFGA F+  HP +YA +LA+K+++ GA  WLVNTGW+GG YG G R+ + +TR +I+A  SG L N  +++   FG+EIPTEV GVP E+L+P   WADK AY  T  KLA +F+ NF+ F
Sbjct:  319 AYPITQIDNIVPEGRGGHPKNIVFLTADAFGVLPPLSRLTPEQTMYQFISGFTAKIPGTEQGVTEPQPTFSTCFGAPFMPRHPGEYARLLAQKVRESGANVWLVNTGWTGGQYGEGQRMSIQHTRTLINAALSGQLDNVKFEREPFFGLEIPTEVPGVPKEVLNPREAWADKAAYDRTARKLARMFRENFKRF 511          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BRASB (Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.296e-56
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP++YIPNA      PHPKNV++LA DAFGVLPP++KL+ AQ MYHF+SGYTA VAGTE G+  EP   FS CFG+ F+ L P+ Y  ML + + +H    WLVNTGW+GG YG GSR+ +  TR ++ A   GSL N  ++    FG  +PT + GVPSEILDP NTWADK  + +T   L G+F++NF  F       + ++  ++ AA P+
Sbjct:  324 AYPLDYIPNASRTGRAPHPKNVVMLAADAFGVLPPIAKLSPAQAMYHFLSGYTAKVAGTERGLGNEPQPEFSTCFGSPFLPLDPSVYGNMLRQLIAEHNVDCWLVNTGWTGGKYGTGSRMPIKVTRALLTAALDGSLRNVEFRTDKYFGFAVPTALPGVPSEILDPVNTWADKAEFDKTARALVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_ROSDO (Phosphoenolpyruvate carboxykinase [ATP] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.692e-56
Identity = 102/191 (53.40%), Postives = 129/191 (67.54%), Query Frame = -1
Query:  237 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFE 809
            AYP+ YI NA     G HPKN+I+L CDAFGVLPP+S+L  AQ MYHF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+  HGAT WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A ++K   FG ++P +V GVP  +LDP  TW D +AY     KL  +F  NFE
Sbjct:  326 AYPLHYISNASQAARGGHPKNIIMLTCDAFGVLPPISRLTPAQAMYHFLSGFTSKVAGTERGVTEPEPTFSTCFGAPFMPRRPEVYGNLLREKIATHGATCWLVNTGWTGGAYGTGSRMPIKATRGLLTAALDGSLADAEFRKDPNFGFQVPVDVTGVPGILLDPRRTWDDAEAYDRQAAKLVKMFSDNFE 516          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.692e-56
Identity = 102/193 (52.85%), Postives = 136/193 (70.47%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            +YPI +IPN      G HP +VI+L CDAFGVLPP+++L  AQ MYHF+SGYTA VAGTE G+ EP ATFSACFGA F+ L P+ YA +L +K+  H  + WLVNTGWSGG  G G R+K+ Y+R +++A   G+L   ++ K  VFG++IP+   G+P++IL+P N W+DK AY  T  KL  +F+ NFE F
Sbjct:  325 SYPITHIPNIVGEGCGGHPNHVIMLTCDAFGVLPPIARLTPAQAMYHFLSGYTAKVAGTEAGVTEPQATFSACFGAPFMALRPSLYADLLGKKIASHKVSCWLVNTGWSGGGPGIGGRMKIAYSRALVNAALDGTLGAGSFVKDSVFGLDIPSACPGLPADILNPRNVWSDKSAYDATAHKLVEMFRHNFEQF 517          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPT (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain TIE-1) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.887e-56
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP+E IPNA +      PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EPT  FS CFG+ F+   P+ Y  ML E + KH    WLVNTGW+GG YG G R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPSEILDP  TWADK A+  T  KL G+F++NF  F       + ++  E+ AA P+
Sbjct:  325 AYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRELIAKHNVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDGSLRNVEFRTDPYFGFAVPTALPGVPSEILDPVKTWADKAAFDTTARKLVGMFQKNFAKF-------EAQVDAEVRAAAPD 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris GN=pckA PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.887e-56
Identity = 107/214 (50.00%), Postives = 138/214 (64.49%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP+E IPNA +      PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EPT  FS CFG+ F+   P+ Y  ML E + KH    WLVNTGW+GG YG G R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPSEILDP  TWADK A+  T  KL G+F++NF  F       + ++  E+ AA P+
Sbjct:  325 AYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRELIAKHNVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDGSLRNVEFRTDPYFGFAVPTALPGVPSEILDPVKTWADKAAFDTTARKLVGMFQKNFAKF-------EAQVDAEVRAAAPD 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHILO (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium loti GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.887e-56
Identity = 102/193 (52.85%), Postives = 130/193 (67.36%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+++IPNA       HPKN+I+L  DAFGV+PP+++L  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L E +  HGA  WLVNTGW+GG+YG G R+ +  TR ++ A   GSL    ++    FG E+P  V GV S ILDP +TWADK AY     +L G+F  NFE F
Sbjct:  324 AYPLDFIPNASKTGRASHPKNIIMLTADAFGVMPPIARLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRELIASHGADCWLVNTGWTGGAYGTGKRMPIKATRALLTAALDGSLKTGEFRTDANFGFEVPVAVPGVDSAILDPRSTWADKPAYDRQAARLVGMFAVNFEKF 516          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACC2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus (strain G9842) GN=pckA PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.887e-56
Identity = 104/193 (53.89%), Postives = 130/193 (67.36%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  SG L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  321 AYPMHAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALSGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKENFKKF 513          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_FLAJ11.296e-5651.64Phosphoenolpyruvate carboxykinase [ATP] OS=Flavoba... [more]
PCKA_DINSH1.296e-5652.04Phosphoenolpyruvate carboxykinase [ATP] OS=Dinoros... [more]
PCKA_DEIGD1.296e-5653.89Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA_BRASB1.296e-5649.77Phosphoenolpyruvate carboxykinase [ATP] OS=Bradyrh... [more]
PCKA_ROSDO1.692e-5653.40Phosphoenolpyruvate carboxykinase [ATP] OS=Roseoba... [more]
PCKA_GEOSM1.692e-5652.85Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_RHOPT2.887e-5650.00Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHOPA2.887e-5650.00Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_RHILO2.887e-5652.85Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_BACC22.887e-5653.89Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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