CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACCN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.097e-55
Identity = 103/201 (51.24%), Postives = 135/201 (67.16%), Query Frame = -1
Query:  207 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKD 809
            AYPI+ I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR ++ A  +G L      K D+FG+++P  V  VP E+L PE TWAD+ AYK+  ++LA  FK NF+ F N  + KD
Sbjct:  321 AYPIDAIDNIVLPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLAYTRAMVQAALNGELDKVETVKHDIFGLDVPLHVPSVPDEVLMPEQTWADQAAYKQKAIELANQFKENFKKFDN--VSKD 519          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACAN (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis GN=pckA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.097e-55
Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  +G L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  321 AYPMHAIDNIILPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKANFKKF 513          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACAA (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus anthracis (strain A0248) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.097e-55
Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+  I N  +P V  HP  +I L  DA GVLPP+SKL+  Q MYHF+SGYT+ +AGTE G+  P ATFS CFG+ F+ L  ++YA ML EK++KH A  +LVNTGW+GG YG G R+ L YTR +I A  +G L      K D+FG+E+P  V GVP E+L PE TWADK AYK   ++LA  FK NF+ F
Sbjct:  321 AYPMHAIDNIILPSVAGHPNTIIFLTADASGVLPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGEKIEKHDAKVFLVNTGWTGGEYGVGKRMNLGYTRAMIQAALNGELAKTETAKHDIFGLEVPLHVPGVPDEVLMPEQTWADKAAYKAKAIELANEFKANFKKF 513          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_FUSNN (Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobacterium nucleatum subsp. nucleatum GN=pckA PE=3 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.871e-55
Identity = 105/214 (49.07%), Postives = 140/214 (65.42%), Query Frame = -1
Query:  165 YPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPNF 806
            YPI+YIPNA++  VG  PK VI L  D+FGVLPP+S+L+    MYHF++G+TA +AGTE G+KEP  TFS CFG  F+ + P+ YA ML E+++KH    +L+NTGWSGG+YG G RI L YTR ++ A+ +G   NA YK  D+F ++IP    GVPSEI++P +TW D+  Y     KLA LF  NF+        K   + E I  AGP +
Sbjct:  317 YPIDYIPNAELSGVGGIPKVVIFLTADSFGVLPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGERLKKHNTKVYLINTGWSGGAYGTGKRINLKYTRAMVTAVLNGYFDNAEYKHDDIFNLDIPQSCPGVPSEIMNPIDTWQDRDKYIIAAKKLANLFYNNFK-------EKYPNMPENITNAGPKY 523          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CAMJR (Phosphoenolpyruvate carboxykinase [ATP] OS=Campylobacter jejuni (strain RM1221) GN=pckA PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.871e-55
Identity = 107/199 (53.77%), Postives = 137/199 (68.84%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            +YPIE+I N +      HPKN+I L+ DAFG+LPPVSKL+  Q MY+F+SGYTA VAGTE GI EP ATFSACFG  F+ LHPT YA +L EK++KH    +LVNTGWSGGSY  G R+ +  TR  I+AI  GS+    ++  +VF + IP  +EGV S +L+P NTW DK AY  T  KLA +F +NF+ + + K G
Sbjct:  316 SYPIEHIENHEPSLKAGHPKNIIFLSADAFGILPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGEKIEKHEVNVYLVNTGWSGGSYSVGKRMSIKATRACINAILDGSITKCEFENFEVFDLAIPKALEGVESVLLNPINTWLDKNAYIATRDKLAHMFIQNFKRYEDVKEG 514          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_AMOA5 (Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebophilus asiaticus (strain 5a2) GN=pckA PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.444e-55
Identity = 100/193 (51.81%), Postives = 132/193 (68.39%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+EYIP A IP +G  PK++  L+CDA+GVLPP+S+L+  Q +++F+SGYTA +AGTE GI  P A FSACFGA F+ LHPT+YA MLA+K++K+  T WLVNTGW GG YG G RI L YTR ++ A  SG L  A ++K  +F + IP     VP+ IL+P NTW   + Y+    KL   F  NF ++
Sbjct:  326 AYPLEYIPGALIPSIGSIPKHIFFLSCDAYGVLPPISQLDKDQAIHYFLSGYTAKIAGTEAGISAPKAVFSACFGAPFLPLHPTRYATMLADKLEKYEVTVWLVNTGWIGGGYGIGKRIDLNYTRAMVTAALSGELAKAGFEKDAIFNLSIPNACPEVPTHILNPSNTWNSVKEYELEAHKLMEAFASNFALY 518          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BRUSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Brucella suis GN=pckA PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.168e-55
Identity = 102/196 (52.04%), Postives = 132/196 (67.35%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            AYP+++IPNA     G  PKN+I+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL NA ++    FG  +P EV GV S ILDP +TWADK AY     KL  +F  NFE F ++
Sbjct:  324 AYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNNAEFRIDPNFGFAVPVEVPGVESSILDPRSTWADKVAYDAQAKKLVDMFVSNFEKFESH 519          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHOP2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain HaA2) GN=pckA PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.444e-55
Identity = 104/214 (48.60%), Postives = 137/214 (64.02%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP+E IPNA +      PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP   FS CFG+ F+   P+ Y  ML E + KH    WLVNTGW+GG YG G R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPS+ILDP  TWADK A+  T  KL G+F++NF  F       + ++  ++ AA P+
Sbjct:  325 AYPLESIPNASLTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPEPEFSTCFGSPFLPRDPSVYGNMLRELIAKHDVDCWLVNTGWTGGIYGTGHRMPIKVTRALLTAALDGSLRNVEFRTDPYFGFAVPTSLHGVPSDILDPVKTWADKAAFDATARKLVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_CANAL (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida albicans GN=PCK1 PE=3 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 5.444e-55
Identity = 109/216 (50.46%), Postives = 138/216 (63.89%), Query Frame = -1
Query:  171 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGS--YGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWAD-KQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGP 809
            AYPI++IP+AKIPC+        LL CDA GVL  VSKL  AQ MYHFISGYT+ +AG+E+G+ EP ATFSACFG  F++LHP KYA  LA+K+ +H A  WL+NTGW G S   G G R  L YTR I+DAIHSG L    Y+K  VF + +PT   GVPSEIL+P   W     ++ + +  LA  F  NF+ +        ++ T E+ AAGP
Sbjct:  343 AYPIDFIPSAKIPCLPTPIPQYYLLTCDASGVLATVSKLTNAQVMYHFISGYTSKMAGSEEGVTEPHATFSACFGQPFLVLHPMKYAQQLADKISEHNANAWLLNTGWVGSSVAQGGGKRCPLKYTRAILDAIHSGELSKVEYEKVPVFNLNVPTSCPGVPSEILNPTKAWTQGTDSFNKEIKSLATKFAENFKTYA-------DQATAEVKAAGP 551          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA1_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA1 PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.110e-55
Identity = 99/198 (50.00%), Postives = 133/198 (67.17%), Query Frame = -1
Query:  216 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKI 809
            AYP+++IPNA IP VG HP+ V+ L  DAFGV+PP++KL   Q MY+F+SGYT+ +AGTE G+ EP ATFS CFGA F+   P  YA +L E++ +H A+ +LVNTGW+GG YG G R+ LPYTR ++ A  +G L    +    VFG  +P    GVP+EIL+P NTWA+ + Y     KLA LF+ NF  F +  +
Sbjct:  319 AYPVDFIPNAVIPGVGGHPQTVVFLTADAFGVMPPIAKLTREQAMYYFLSGYTSKLAGTERGVTEPKATFSTCFGAPFLPRSPMVYANLLGERIARHNASVYLVNTGWTGGPYGTGRRMSLPYTRAMVRAALNGELDKVEFTPDPVFGFLVPKACPGVPAEILNPRNTWAETEKYDAMARKLASLFRENFAKFKDVPV 516          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_BACCN1.097e-5551.24Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAN1.097e-5553.37Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_BACAA1.097e-5553.37Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_FUSNN1.871e-5549.07Phosphoenolpyruvate carboxykinase [ATP] OS=Fusobac... [more]
PCKA_CAMJR1.871e-5553.77Phosphoenolpyruvate carboxykinase [ATP] OS=Campylo... [more]
PCKA_AMOA52.444e-5551.81Phosphoenolpyruvate carboxykinase [ATP] OS=Amoebop... [more]
PCKA_BRUSU4.168e-5552.04Phosphoenolpyruvate carboxykinase [ATP] OS=Brucell... [more]
PCKA_RHOP25.444e-5548.60Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_CANAL5.444e-5550.46Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA1_MOOTA7.110e-5550.00Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Moore... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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