CX078110

Overview
NameCX078110
Unique NameCX078110
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_GEOTN (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacillus thermodenitrificans (strain NG80-2) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.609e-54
Identity = 99/195 (50.77%), Postives = 130/195 (66.67%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYP++ I N   P V  HP  ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE G+ EP ATFS CFGA F+     +YA ML +K+ +H    +LVNTGW+GG YG GSR+KL YTR ++ A   G L N    +  +FG+ IP  V GVP ++L P+NTWADKQAY++   +LA  F+ NF+ F +
Sbjct:  321 AYPLQAIKNIVDPSVAGHPSTIVFLTADAFGVLPPISKLTREQAMYHFLSGYTSKLAGTERGVTEPEATFSTCFGAPFLPRPAVEYAEMLGQKIAEHNVRVFLVNTGWTGGPYGVGSRMKLAYTRAMVQAAVEGELDNVETVQDPIFGLAIPAHVPGVPDDVLRPQNTWADKQAYEQKAKELAEKFRANFQKFAH 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_OCHA4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.019e-54
Identity = 99/196 (50.51%), Postives = 132/196 (67.35%), Query Frame = -1
Query:  222 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNY 809
            AYP+++IPNA     G  PKN+I+L  DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + +H    WLVNTGW+GG+YG G R+ +  TR ++ A   GSL +A ++    FG  +P +V GV + ILDP +TWADK AY     KL  +F  NFE F ++
Sbjct:  324 AYPLDFIPNASKSGKGGQPKNIIMLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLRKLIAEHKVDCWLVNTGWTGGAYGVGKRMPIKATRALLAAALDGSLNDAEFRIDPNFGFAVPVDVPGVDTSILDPRSTWADKAAYDAQAKKLVDMFVTNFEKFESH 519          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_METS4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium sp. (strain 4-46) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.019e-54
Identity = 98/193 (50.78%), Postives = 129/193 (66.84%), Query Frame = -1
Query:  231 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIF 809
            AYP+ +IPNA       HPKN+++L CDAFGVLPP++KL  A+ MYHF+SGYTA VAGTE G+K P ATFS CFGA F+  HP+ Y  +L + + +H    WLVNTGW+GG  G G R+ +  TR+++ A   GSL  A+Y++   FG  +PT V GV   IL P  TWADK A+ ET  +L  +F+ NF+ F
Sbjct:  325 AYPLPFIPNASATGRAGHPKNIVMLTCDAFGVLPPIAKLTGAEAMYHFLSGYTAKVAGTEKGLKGPEATFSTCFGAPFMPRHPSVYGNLLRDLIARHHVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLTAALDGSLAKADYRRDPYFGFAVPTSVPGVEPHILYPVKTWADKAAFAETAKRLVEMFQANFKRF 517          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_METEP (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium extorquens (strain PA1) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.019e-54
Identity = 96/211 (45.50%), Postives = 137/211 (64.93%), Query Frame = -1
Query:  177 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAA 809
            AYP+++I NA       HPKN+++L CDAFGV+PP++KL  A+ MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L E M +HG   WLVNTGW+GG  G G R+ +  TR+++ A   GSL    +++   FG  +P EV GV +++L P  TW +K A+ +T  +L  +F+ NF+ F ++ +  D +  E + AA
Sbjct:  327 AYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETWTNKAAFADTATRLVTMFRENFKRFESH-VDADVRAAEPVAAA 536          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_METC4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=pckA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.019e-54
Identity = 96/211 (45.50%), Postives = 137/211 (64.93%), Query Frame = -1
Query:  177 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAA 809
            AYP+++I NA       HPKN+++L CDAFGV+PP++KL  A+ MYHF+SGYTA VAGTE G+  P ATFS CFGA F+  HP+ Y  +L E M +HG   WLVNTGW+GG  G G R+ +  TR+++ A   GSL    +++   FG  +P EV GV +++L P  TW +K A+ +T  +L  +F+ NF+ F ++ +  D +  E + AA
Sbjct:  327 AYPLDFIANASATGRAGHPKNIVMLTCDAFGVMPPIAKLTGAEAMYHFLSGYTAKVAGTERGLTAPEATFSTCFGAPFMPRHPSVYGNLLRELMAEHGVDCWLVNTGWTGGGVGTGRRMPIRVTRRLLSAALDGSLAQVEFRRDPYFGFSVPVEVPGVETQVLSPVETWTNKAAFADTATRLVTMFRENFKRFESH-VDADVRAAEPVAAA 536          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACA2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus amyloliquefaciens (strain FZB42) GN=pckA PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54
Identity = 100/195 (51.28%), Postives = 126/195 (64.62%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYPIE I N   P +  HP+ ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE G+  P  TFS CFG+ F+ L    YA ML  K+ +HG   +LVNTGW+GG YG G R+KL YTR ++ A   G L   +     +FG+  P  V GVP E+L PENTW+DKQAY E  L LA  FK NF+ F++
Sbjct:  321 AYPIEMIGNIVQPSIAGHPQAIVFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTSPQTTFSTCFGSPFLPLPAHVYAEMLGHKIDEHGVQVFLVNTGWTGGGYGVGERMKLSYTRAMVKAAIEGRLNQTDMTADSIFGLRSPVHVPGVPDEVLQPENTWSDKQAYNEKALFLANEFKENFKKFSH 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_SINMW (Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhizobium medicae (strain WSM419) GN=pckA PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.027e-53
Identity = 99/199 (49.75%), Postives = 131/199 (65.83%), Query Frame = -1
Query:  213 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIG 809
            AYP+ +IPNA      P P+ +I+L  DAFGVLPP++KL   Q MYHF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L E + ++G T WLVNTGW+GG+YG GSR+ +  TR ++ A   GSL +A+++    FG  +P  V GV S ILDP +TWAD  AY     +L  +F  NF  F ++  G
Sbjct:  324 AYPLHFIPNASKTGTAPQPRTIIMLTADAFGVLPPIAKLTPEQAMYHFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKELIARNGVTCWLVNTGWTGGAYGTGSRMPIKVTRALLSAALDGSLNSASFRSDANFGFAVPVSVPGVESRILDPRSTWADGAAYDAQARRLVDMFIANFAKFESHVDG 522          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_BACSU (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus subtilis GN=pckA PE=3 SV=3)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 100/195 (51.28%), Postives = 126/195 (64.62%), Query Frame = -1
Query:  225 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTN 809
            AYPI  I N   P +  HP  ++ L  DAFGVLPP+SKL   Q MYHF+SGYT+ +AGTE G+  P  TFS CFG+ F+ L    YA ML +K+ +HGA  +LVNTGW+GG YG G R+KL YTR ++ A   G L +A     D+FG+ IP  V GVP  IL PENTW +K+ YKE  + LA  FK NF+ F +
Sbjct:  321 AYPIHMINNIVTPSMAGHPSAIVFLTADAFGVLPPISKLTKEQAMYHFLSGYTSKLAGTERGVTSPETTFSTCFGSPFLPLPAHVYAEMLGKKIDEHGADVFLVNTGWTGGGYGTGERMKLSYTRAMVKAAIEGKLEDAEMITDDIFGLHIPAHVPGVPDHILQPENTWTNKEEYKEKAVYLANEFKENFKKFAH 515          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_RHOPS (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodopseudomonas palustris (strain BisB5) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.751e-53
Identity = 101/214 (47.20%), Postives = 136/214 (63.55%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP+E IPNA        PKNV++LA DAFGV+PP++KL  AQ MYHF+SGYTA VAGTE G+ EPT  FS CFG+ F+   P+ Y  ML + +  H    WLVNTGW+GG YG G R+ +  TR ++ A   GSL NA ++    FG  +PT + GVPS+IL+P  TWADK  + +T   L G+F++NF  F       + ++  ++ AA P+
Sbjct:  325 AYPLESIPNASPTGRAGQPKNVVMLAADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTERGVTEPTPEFSTCFGSPFLPRDPSVYGNMLRDLIHNHNVDCWLVNTGWTGGKYGTGHRMPIKVTRALLTAALDGSLRNAEFRTDPYFGFAVPTALPGVPSDILEPAKTWADKAEFDKTARALVGMFQKNFAKF-------EAQVDADVRAAAPD 531          
BLAST of CX078110 vs. ExPASy Swiss-Prot
Match: PCKA_OLICO (Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=pckA PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.751e-53
Identity = 103/215 (47.91%), Postives = 138/215 (64.19%), Query Frame = -1
Query:  168 AYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGI-KEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLPYTRKIIDAIHSGSLLNANYKKTDVFGVEIPTEVEGVPSEILDPENTWADKQAYKETLLKLAGLFKRNFEIFTNYKIGKDNKLTEEILAAGPN 809
            AYP++ IPNA        PKN+++LA DAFGVLPP++KL  +Q MYHF+SGYTA VAGTE G+  EP   FSACFGA F+   PT Y  ML + + KH    WLVNTGW+GG +G G+R+ +  TR ++ A   GSL N  ++    FG  +PT + GVPS+ILDP NTWADK  +K+T   L  +F++NF  F       +  +  ++LAA P+
Sbjct:  325 AYPLDAIPNASPTGCAGQPKNIVMLAADAFGVLPPIAKLTPSQAMYHFLSGYTAKVAGTERGLGSEPQPEFSACFGAPFLPRDPTVYGEMLRKLIAKHNVDCWLVNTGWTGGKFGIGNRMPIKVTRALLTAALDGSLRNVTFRTDPYFGFAVPTALPGVPSDILDPINTWADKADFKKTAQALVSMFRQNFTKF-------EKLVDADVLAAAPD 532          
The following BLAST results are available for this feature:
BLAST of CX078110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_GEOTN4.609e-5450.77Phosphoenolpyruvate carboxykinase [ATP] OS=Geobaci... [more]
PCKA_OCHA46.019e-5450.51Phosphoenolpyruvate carboxykinase [ATP] OS=Ochroba... [more]
PCKA_METS46.019e-5450.78Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_METEP6.019e-5445.50Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_METC46.019e-5445.50Phosphoenolpyruvate carboxykinase [ATP] OS=Methylo... [more]
PCKA_BACA27.861e-5451.28Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_SINMW1.027e-5349.75Phosphoenolpyruvate carboxykinase [ATP] OS=Sinorhi... [more]
PCKA_BACSU1.341e-5351.28Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_RHOPS1.751e-5347.20Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodops... [more]
PCKA_OLICO1.751e-5347.91Phosphoenolpyruvate carboxykinase [ATP] OS=Oligotr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_7A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-7A07-B13-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078110 ID=CX078110; Name=CX078110; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTTGACTCAAATATCGGATTACTTAATTAATTCAGAGAACAAG
TTTACATATGAATCGAACCACACATGTCGAATATGACTATATTACGCTTT
ATTTCCATCATATTTCCCAAACCACACTCACGTTCTTTGCTTGTTCTTCA
CTCGGTCTAAATTAGAAATTTGGACCAGCTGCAAGGATCTCTTCAGTGAG
CTTGTTGTCCTTGCCAATCTTGTAGTTTGTGAATATTTCAAAGTTCCTCT
TGAAAAGACCAGCCAGCTTCAGCAGTGTCTCCTTGTAAGCCTGCTTGTCT
GCCCAAGTGTTCTCTGGATCCAGGATTTCTGAAGGCACTCCCTCGACTTC
AGTGGGGATTTCCACCCCAAATACATCAGTTTTCTTGTAATTTGCATTCA
ACAGGCTGCCAGAGTGTATCGCATCAATGATTTTTCGAGTGTACGGTAAC
TTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCAGTGTTGAC
GAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAGCATTGCTG
CATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGCAAGCTGAA
AATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCTACCAAAGC
AGTGTAGCCACTGATGAAATGGTACATTGTTTGTGCCAGGTTCAGCTTGC
TCACTGGTGGGAGTACACCAAAAGCATCACATGCCAAAAGGATGACATTC
TTGGGATGAGGACCAACGCATGGTATCTTTGCATTGGGGATATACTCAAT
GGGGTAGGC
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