EY702355

Overview
NameEY702355
Unique NameEY702355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length969
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702355 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.788e-12
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 1 
Query:  262 KQPVNTLKTVDTQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTIQGSKDSGFEGNEYRISLSFPMITPF 486
            K   +++   D  +V KRL  ELM LMM+ + GISAFP+ +NIF W GTI G +++ + G  YR+SL FP   P+
Sbjct:   19 KHSDDSMPVKDNHAVSKRLHKELMNLMMANERGISAFPDGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPY 93
The following BLAST results are available for this feature:
BLAST of EY702355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
UBE2C_DROME5.788e-1245.33Ubiquitin-conjugating enzyme E2 C OS=Drosophila me... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-006-B01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702355 ID=EY702355; Name=EY702355; organism=Citrus sinensis; type=EST; length=969bp
CCACGCGTCCGACTCTCTGAAGAAGAAGAGAAGATCAATAAAACCCTAAT
TCGTTCTCTTCTTCTTCTTCTTCTTCTCATCGTCACTGCAATTGAGCAAT
CCGACAGCGTTTTCTTGCCCTTTCTTGATCTGGGTTATTGAGTTTTCTTT
GTTTGAATCAAGAAACAAAGAAGAAAGAAAAATAATACAAAAGTTATGGC
TACAGTTAACGCTTACCAAGGCAATACTCCGGTGGCCGCTTCAACAACGG
CAACAGCACCGAAACAGCCCGTCAACACTTTAAAGACTGTGGATACGCAA
TCTGTGCTTAAAAGGCTGCAATCTGAATTGATGGCCTTAATGATGAGTGG
GGATTCTGGGATATCTGCATTCCCGGAGGAGGATAACATATTCTGCTGGA
AAGGTACGATCCAGGGCAGCAAAGACTCTGGTTTCGAAGGAAATGAATAC
AGGATTTCCCTTTCATTTCCCATGATAACCCCCTTCAAGCTTCTAAAGTG
AATTCCTAACCCGGCTGTTTCCTCCCCAATGTTAATAATTACGGCAAAAT
TTGGTTGGGCTTTCTCCAGGATAAATGTGCCATCACCTTTTGGTTGGGGG
AAACGGTGGGGGCTGGGGGACGGAGGACGTCGGCTGGGAGACCCAAACTT
TTAGTCCTTCTTTTAAACTAGTCGTGTGGAGGTTCAGTTTGTGGGAAAAT
CCGGAAAAAATATAGGCCAAAAGGGCTTTAGAAACTTTTATCCATCCTTA
CGAGGCGGGGTAGTGCTGGGGAAAAATTCTAACGGAGCATTAAAGAGGGG
GGGGTCAAAATGGGGTGTGGTTCAGAGATCATAGCTGTGGCTGCGGTTAG
GGAGAGGGCTGTAGGCAAAATGCTCGCGGTCTGAGAGGGGCAGCCGGTCG
CGGGGGACGCTGGGGGGAGCGAAGAACGCGTCGTTTTTTCCTGGTGCCGC
CTAGGAGGAGGGAGGGGGG
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