CX078085

Overview
NameCX078085
Unique NameCX078085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH6_HUMAN (Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.178e-22
Identity = 50/139 (35.97%), Postives = 84/139 (60.43%), Query Frame = 3 
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGE 425
            +F +A++ G TE +NP+D  KP+Q+V+ DMT+ G+D   E  G++  + +A    ++ +GV V+VGV       K       + R+LKG+ FG +K R  +P +V  YM ++L ++  ITHT+   +IN+A +LM  G+
Sbjct:  229 KFKKAQELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGVLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAEKLNLDPLITHTLNLDKINEAVELMKTGK 367
The following BLAST results are available for this feature:
BLAST of CX078085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH6_HUMAN2.178e-2235.97Alcohol dehydrogenase 6 OS=Homo sapiens GN=ADH6 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H05-O10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078085 ID=CX078085; Name=CX078085; organism=Citrus sinensis; type=EST; length=619bp
ACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTG
AATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGACATGAC
CAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCA
TGATTTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTT
GTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCATGAATCT
GCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACAAACCTC
GCTCTGATCTTCCTTCTGTTGTTGAAAAATACATGAACAAGGAGTTGGAG
GTCGAGAAATTCATCACTCACACTGTGCCCTTCTCGGAGATAAACAAGGC
ATTTGACCTCATGCTTGCGGGAGAAAGCATTAGGTGCATCATTCGCATGG
ATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCAGAATGA
AGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATAAGTAAT
TTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGAGTTGTG
TTTTCTACATAAAAAAAAA
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