CX078085

Overview
NameCX078085
Unique NameCX078085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADH2_HORVU (Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.223e-57
Identity = 102/150 (68.00%), Postives = 126/150 (84.00%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            P++  +AKKFG T+FVNPKD+ KPVQ+VI +MT+GGV+R+VECTG+  AMISAFECVHDGWGVA      +K+  FKTHPMN LNERTL+GTFFGNYKPR+ LP VV+ YM KELE++KFITH++PFS+IN AFDLML GE +RC+IR +
Sbjct:  229 PAKHEQAKKFGCTDFVNPKDHTKPVQEVIVEMTDGGVNRAVECTGNADAMISAFECVHDGWGVA------HKEAVFKTHPMNFLNERTLRGTFFGNYKPRTGLPGVVDMYMRKELELDKFITHSLPFSQINTAFDLMLRGEGLRCVIRSE 372          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43
Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            +F+ AK FGVTEFVNPKD+DKP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE++V++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  233 KFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.312e-43
Identity = 79/148 (53.38%), Postives = 107/148 (72.30%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 452
            +F+ AK FGVTEFVNPKD+DKP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+NKE++V++++TH++  ++INKAFDL+  G  +RC++  D
Sbjct:  233 KFDVAKNFGVTEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVLATD 380          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 1.451e-42
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            ++  AKKFGV EFVNPKD+DKP+Q+VI D+T+GGVD S EC G+V  M +A EC H GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +VEKYMNKE++V+++ITH +   EINKAFDL+  G  +RC++
Sbjct:  231 KYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.232e-42
Identity = 76/146 (52.05%), Postives = 105/146 (71.92%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            ++++ AK FGVTEF+NPKD++KP+QQVI D+T+GGVD S EC G+V  M SA EC H GWG +V+VGV        T P  L+  R  KGT FG +K RS +P +VEKY+ KE++V+++ITH +   EINKAFDL+  G+ +RC++
Sbjct:  229 NKYDTAKNFGVTEFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVL 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.040e-40
Identity = 74/147 (50.34%), Postives = 105/147 (71.43%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            P++F  AK+FG TEFVNPKD+ KP+Q+V+ +MT+GGVD S EC G+VQ M +A E  H GWG +V++GV        T P  L+  R  KGT FG +K    +P +VE YM+K+L+V++F+THT+PF +IN+ F+LM AG+SIR ++
Sbjct:  228 PAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.025e-40
Identity = 73/147 (49.66%), Postives = 104/147 (70.75%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            P +F  AK+FG T+ VNPKD+ KPV+QV+ +MT+GGVD S EC G++  M +A E  H GWG +V++GV        T P  L+  RT KGT FG YK    +P +VE+YMNK+++V++F+THT+PF +I++ FDLM AG+SIR ++
Sbjct:  227 PDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVL 373          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.150e-39
Identity = 73/147 (49.66%), Postives = 102/147 (69.39%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            P +F +A +FG TE +NPKD+ +PVQ+V+ +MT+GGVD S EC G+V+ M SA E  H GWG +V++GV        T P  L+  R  K T FG +K    +P +VE YMNK+L+V++F+THT+PF  IN+ FDLM AG+SIRC++
Sbjct:  227 PEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGVAGAGQEIATRPFQLVTGRVWKATAFGGWKSVESVPKLVEDYMNKKLKVDEFVTHTLPFDSINEGFDLMHAGKSIRCVL 373          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.368e-39
Identity = 69/147 (46.94%), Postives = 108/147 (73.47%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F  AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWG++V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH++PF +IN+AFDLM AG+SIR ++++
Sbjct:  228 KFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHSLPFDQINEAFDLMHAGKSIRTVVKL 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.732e-39
Identity = 72/147 (48.98%), Postives = 102/147 (69.39%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F+ AK FGVTEFVNPK++DKP+QQV+ D+T+GGVD S EC G+V  M +A EC   GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +V+KYM KE++V+++ITH +  ++IN AF L+  G  +RC++ M
Sbjct:  233 KFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          
The following BLAST results are available for this feature:
BLAST of CX078085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH2_HORVU1.223e-5768.00Alcohol dehydrogenase 2 OS=Hordeum vulgare GN=ADH2... [more]
ADHX_ORYSJ1.312e-4353.38Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI1.312e-4353.38Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ARATH1.451e-4253.10Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA3.232e-4252.05Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_SPAAU1.040e-4050.34Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHL_GADMO3.025e-4049.66Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHH_GADMO1.150e-3949.66Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_BOVIN4.368e-3946.94Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_MAIZE9.732e-3948.98Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H05-O10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078085 ID=CX078085; Name=CX078085; organism=Citrus sinensis; type=EST; length=619bp
ACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTG
AATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGACATGAC
CAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCA
TGATTTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTT
GTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCATGAATCT
GCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACAAACCTC
GCTCTGATCTTCCTTCTGTTGTTGAAAAATACATGAACAAGGAGTTGGAG
GTCGAGAAATTCATCACTCACACTGTGCCCTTCTCGGAGATAAACAAGGC
ATTTGACCTCATGCTTGCGGGAGAAAGCATTAGGTGCATCATTCGCATGG
ATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCAGAATGA
AGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATAAGTAAT
TTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGAGTTGTG
TTTTCTACATAAAAAAAAA
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