CX078085

Overview
NameCX078085
Unique NameCX078085
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length619
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 1.660e-38
Identity = 70/147 (47.62%), Postives = 106/147 (72.11%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F  AK+FG TE +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH + F EINKAF+LM +G+SIR ++++
Sbjct:  228 KFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.698e-38
Identity = 70/146 (47.95%), Postives = 106/146 (72.60%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 446
            +F +AK+FG TE ++P D+ KP+Q+V+ +MT+GGVD S EC G+V  M +A E  H GWGV+V+VGV        T P  L+  RT KGT FG +K    +P +V++YM+K+++V++F+THT+PF +IN+AF+LM AG+SIR +++
Sbjct:  227 KFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 4.830e-38
Identity = 68/147 (46.26%), Postives = 108/147 (73.47%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F +AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+TH++ F +IN+AF+LM AG+SIR ++++
Sbjct:  228 KFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.397e-37
Identity = 70/147 (47.62%), Postives = 104/147 (70.75%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F +AK+FG TE +NP+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +INKAFDLM +G SIR +++M
Sbjct:  228 KFAKAKEFGATECINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 3.131e-37
Identity = 70/149 (46.98%), Postives = 98/149 (65.77%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            P++  +AK FGVT+F+N  D  +P+ QVI  MT GG D S EC G      +A +   DGWG+ V +GVP        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F EINKAF LM  G+ +RC++ M
Sbjct:  231 PAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 5.340e-37
Identity = 67/147 (45.58%), Postives = 105/147 (71.43%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F  AK+FG TE +NP+D+ KP+Q+V+ + T+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++ V++F+T+T+ F +IN+AF+LM +G+SIR ++++
Sbjct:  228 KFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKINVDEFVTNTLSFDQINEAFELMHSGKSIRTVVKI 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.190e-36
Identity = 71/147 (48.30%), Postives = 97/147 (65.99%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            P++F  AK+ G T+ +NPKD+D+P+QQVI +MT  GVD S EC G+V+ M SA EC H GWG +V++GV        T P  L+  R   GT FG  K RS LP +VE+ M  E+++  F+THT+   +IN+AFDLM  G+SIR +I
Sbjct:  221 PAKFELAKQMGATDCINPKDHDQPIQQVIVEMTGWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEQSMRGEIQLAPFVTHTMELKDINQAFDLMHDGKSIRSVI 367          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 2.650e-36
Identity = 72/147 (48.98%), Postives = 96/147 (65.31%), Query Frame = 3
Query:    3 PSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            PS+F  AK+FG T+ +NP DYDKPVQQV+ +MT  GVD + EC G+V  M SA E  H GWG +V++GV        T P  L+  R  KGT FG  K R+ LP +VE  M+ ++E+  F+THT+   +IN+AFDLM  G+SIR +I
Sbjct:  221 PSKFELAKQFGATDCINPNDYDKPVQQVLVEMTKWGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGVAGAGKEISTRPFQLVTGRVWKGTAFGGVKGRTQLPGMVEDAMSGKIELAPFVTHTMELDKINEAFDLMHDGKSIRTVI 367          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 2.650e-36
Identity = 67/147 (45.58%), Postives = 105/147 (71.43%), Query Frame = 3
Query:    9 RFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 449
            +F +AK+FG +E ++P+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +IN+AFDLM +G+SIR +++M
Sbjct:  228 KFAKAKEFGASECISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of CX078085 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.007e-35
Identity = 70/146 (47.95%), Postives = 99/146 (67.81%), Query Frame = 3
Query:    6 SRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 443
            S+F   KKFG+TEFVNPK + K VQ+V+ +MT+ GVD + EC G+V  M +A E  H GWG +V+VGV    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK+L +++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  229 SKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          
The following BLAST results are available for this feature:
BLAST of CX078085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHX_HUMAN1.660e-3847.62Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_UROHA3.698e-3847.95Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HORSE4.830e-3846.26Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_RAT2.397e-3747.62Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHL6_ARATH3.131e-3746.98Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RABIT5.340e-3745.58Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
FRMA_SYNY31.190e-3648.30S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
FRMA_PASPI2.650e-3648.98S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]
ADHX_MOUSE2.650e-3645.58Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_OCTVU1.007e-3547.95Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6H05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6H05-O10-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078085 ID=CX078085; Name=CX078085; organism=Citrus sinensis; type=EST; length=619bp
ACCCAAGCAGATTCAATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTG
AATCCAAAAGATTATGACAAACCTGTTCAACAGGTGATTGCTGACATGAC
CAATGGTGGAGTGGATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCA
TGATTTCAGCATTTGAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTT
GTGGGTGTGCCAAACAAAGATGATGCATTCAAGACTCATCCCATGAATCT
GCTTAATGAGAGGACTCTTAAGGGTACCTTCTTTGGCAACTACAAACCTC
GCTCTGATCTTCCTTCTGTTGTTGAAAAATACATGAACAAGGAGTTGGAG
GTCGAGAAATTCATCACTCACACTGTGCCCTTCTCGGAGATAAACAAGGC
ATTTGACCTCATGCTTGCGGGAGAAAGCATTAGGTGCATCATTCGCATGG
ATGGTTAGATGTGTCTGCTGTTGCTGATCAATCTAATGGAGGCAGAATGA
AGATGATCACATAATTTTCCAAGTTATATATTACCCCGAGAATAAGTAAT
TTATGCTGTATGTTTGATGACTTGCTGCGAATGGCTTTCAAAGAGTTGTG
TTTTCTACATAAAAAAAAA
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