CX078076

Overview
NameCX078076
Unique NameCX078076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 3.415e-37
Identity = 86/201 (42.79%), Postives = 126/201 (62.69%), Query Frame = -3
Query:  287 ATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 874
            +++R   +L EK + +E V VD+  GE ++  +L++ PFG++PVL  GD K+FESRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D  +L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   12 SSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.874e-35
Identity = 85/202 (42.08%), Postives = 116/202 (57.43%), Query Frame = -3
Query:  281 TATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 877
            T   RV   L E   EYE+V VD    EHK    L  NPFGQ+P  + GD  LFESRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D  +  DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:   13 TNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 2.448e-35
Identity = 87/199 (43.72%), Postives = 119/199 (59.80%), Query Frame = -3
Query:  278 RVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 865
            R  A L E   EYE+VP+D   GEHK    L+ NPFGQVP L+ GD  L+ESRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D  ++ DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   17 RCVAVLEEAGAEYEIVPLDFSKGEHKAPDHLARNPFGQVPALQDGDLFLWESRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 148.673 bits (374), Expect = 4.175e-35
Identity = 85/198 (42.93%), Postives = 117/198 (59.09%), Query Frame = -3
Query:  278 RVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 865
            R   +L E   +YE+VP++    EHK    L  NPFGQVP L+ GD  LFESRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D  +L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:   17 RCATALEEAGSDYEIVPINFATAEHKSPEHLVRNPFGQVPALQDGDLYLFESRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.706e-34
Identity = 83/199 (41.71%), Postives = 117/199 (58.79%), Query Frame = -3
Query:  284 QRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 868
            QRV     EK++E+E++ VD+   E KK   L   PFGQVP +E G  KLFESRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D FTL DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   15 QRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVD--QWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32
Identity = 81/194 (41.75%), Postives = 114/194 (58.76%), Query Frame = -3
Query:  293 RVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK---GTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 865
            R   +L E  ++YELVP+  + G+H++   L+ NPFG+VPVLE GD  LFESRAI +++ ++   +   G +L    +  A + VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D  +L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   19 RALLALEEAGVDYELVPMSRQDGDHRRPEHLARNPFGKVPVLEDGDLTLFESRAIARHVLRKHKPELLGGGRL----EQTAMVDVWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.777e-31
Identity = 82/203 (40.39%), Postives = 111/203 (54.68%), Query Frame = -3
Query:  293 TATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 877
            T   RV   L E   EYELVP+D  AGEHK+   + LNPF ++P  + GD  LFESRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS T  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   13 TNVARVLLFLEEVGAEYELVPMDFVAGEHKRPQHVQLNPFAKMPGFQDGDLVLFESRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 7.626e-29
Identity = 78/203 (38.42%), Postives = 109/203 (53.69%), Query Frame = -3
Query:  293 TATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 877
            T   RV   L E   EYELVPVD  AGEHK+   + LNPF ++P  + G+    +SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS +  DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   13 TNVARVLLFLEEVGAEYELVPVDFVAGEHKRPQHVQLNPFAKMPGFQDGESLHIKSRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.077e-26
Identity = 73/188 (38.83%), Postives = 110/188 (58.51%), Query Frame = -3
Query:  326 TATQRVFASLYEKELEYELVPVDMKAGEHKKEAFL-SLNPFGQVPVLEHGD-QKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 877
            T T+RV+ +  E  ++ ++VPVD+  GEHK+ A+L + +PFG +PVLE  D  K++ESRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + FTL DL HLP    ++      + D++PHV AW A
Sbjct:   13 TCTKRVYTTAKEIGVDVKIVPVDLMKGEHKEPAYLDNYHPFGVIPVLEDEDGTKIYESRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
BLAST of CX078076 vs. ExPASy Swiss-Prot
Match: EF1G1_ARATH (Probable elongation factor 1-gamma 1 OS=Arabidopsis thaliana GN=At1g09640 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.439e-13
Identity = 60/187 (32.09%), Postives = 92/187 (49.20%), Query Frame = -3
Query:  278 VPVDMKAG-EHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPD---KGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENE-AKLAKILDVYEARLSQSKYLACDSFTLVDLHHLPNINLLLGTPVKKLFDAR-PHVSAWAADITSRPAWAKVLALLK 820
            VP D + G  +K  AFL +NP G+VPVLE  +  +FES AI +Y+++   D    G+ L       A +  W +  +L+    +S L W   + P  G     A  EE   + L + LD     L+ + YL   S TL D+  + N+NL   T + K F +  PHV  +   + ++P + KVL  +K
Sbjct:   30 VPSDFQMGVTNKTPAFLKMNPIGKVPVLETPEGSVFESNAIARYVSRLNGDNSLNGSSLI----EYAQIEQWIDFSSLEI--YASILRW---FGPRMGFMPYSAPAEEGAISTLKRALDALNTHLTSNTYLVGHSITLADIITVCNLNLGFATVMTKKFTSEFPHVERYFWTVVNQPNFTKVLGDVK 207          
The following BLAST results are available for this feature:
BLAST of CX078076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
GSTF3_ARATH3.415e-3742.79Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.874e-3542.08Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF2_ORYSJ2.448e-3543.72Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF1_MAIZE4.175e-3542.93Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF7_ARATH2.706e-3441.71Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE1.939e-3241.75Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF1_WHEAT4.777e-3140.39Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF2_WHEAT7.626e-2938.42Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF5_ARATH2.077e-2638.83Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]
EF1G1_ARATH3.439e-1332.09Probable elongation factor 1-gamma 1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6G10_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6G10-M20-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078076 ID=CX078076; Name=CX078076; organism=Citrus sinensis; type=EST; length=879bp
CTTTTTTACGCAGAATATCTCCAGCTTCGTTTTATTAGGGTACATAGATA
AAATAAAAACCTCAAGCCATCAACATCAAAGTTGAATATGAGGCAGTGCT
GTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCAATATTCTGCA
GAATATTGATGACAAACGCCAAACAAGAGAATACGAACTCGAAAACCAGC
CTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCGACTAACGTCT
AGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAAGGACCTTAG
CCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTAACATGGGGG
CGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACAAATTAATATT
GGGGAGATGATGCAAATCGACCAAGGTGAAGCTGTCGCACGCCAAGTATT
TGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTTGGCAAGCTTA
GCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCCAAACATTGG
CTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGGTCGAACTGGA
GTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGGCTTGCCTGGG
CATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGGGCGATGTATTGGGT
GATTGCCCTTGATTCGAAGAGCTTCTGGTCGCCGTGTTCAAGCACCGGAA
CTTGACCGAATGGATTCAAAGAAAGGAAGGCCTCCTTTTTGTGTTCACCA
GCCTTCATGTCTACGGGGACAAGCTCGTATTCGAGCTCCTTCTCGTAGAG
GGATGCGAAAACTCGCTGCGTAGCAGTTG
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