CX078058

Overview
NameCX078058
Unique NameCX078058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.624e-28
Identity = 71/205 (34.63%), Postives = 107/205 (52.20%), Query Frame = -1
Query:   95 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMV-AVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIE 706
            G   ++Y   +P FN ++N+ M + S +    + +    F+G+ +LVDVGGG G+    I+   P IK    DLPHV+ + P    ++ + GDMF+S+P  DA   K I H + D  C  +LK C +A+    + GKVII++ V+    E     +     DM+M+     G ER E+E+  L   AGFS FK T +Y     IE
Sbjct:  158 GMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALP---ENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIE 359          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.277e-27
Identity = 69/205 (33.66%), Postives = 105/205 (51.22%), Query Frame = -1
Query:   95 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMV-AVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIE 706
            G   ++Y   +  FN ++N+ M + S +    + D    F+G+ +LVDVGGG G+    I+   P I     DLPHV+ + P    ++ + GDMF S+P  DA   K I H + D  C  +LK C +A+    + GKVI+++ V+    E     +     DM+M+     G ER E+E+ +L   AGFS FK T +Y     IE
Sbjct:  160 GMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALP---ENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIE 361          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.626e-26
Identity = 73/234 (31.20%), Postives = 120/234 (51.28%), Query Frame = -1
Query:  182 EEAYALTLTSKLFLKDKP-YCLSPVVLTLTDPVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVR-GSERT 877
            E  Y L    K  +K++    L+P+ L   D VF+   +++     +  +  ++    G   +DY   +P FN I+N+AM+  S +    + +    F+GL ++VDVGGGTG+   +I   +P IK    DLPHV+   P    ++ + GDMF +IP  DA F K I H + DE C K+LK C +A+      G+VI+ + ++    + +  T+  +  D +M+     G ERT
Sbjct:   85 ERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKA--HGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPV---NGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.166e-24
Identity = 65/206 (31.55%), Postives = 105/206 (50.97%), Query Frame = -1
Query:   95 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIP-PADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMV-AVRGSERTEKEWEKLFLDAGFSHFKITPVYGIKSLIE 706
            G   ++Y   +  FN ++N+ M + S +    + D    F    ++VDVGGG G+    +    P I+    DLPHV+ + P    ++ + GDMF S+P   DA   K I H + DE C ++LK C +A+    + GKV++++ V+ E  +     +     DM+M+     G ER E+E+ +L   AGF+ FK T +Y     IE
Sbjct:  163 GMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALP---EHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIE 365          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.414e-22
Identity = 74/242 (30.58%), Postives = 122/242 (50.41%), Query Frame = -1
Query:  140 LTSKLFLKDKPYCLSPVVLTLTDPVFVNPCHFLSRWFRDNELSAYETANDGTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVR---GSERTEKEWEKLFLDAGFS 856
            L + L   D    L P+++   D V +     L+ +  +  +  ++ A+ G + +DY   +  FN ++NQ MA  + L    + D    F  +  LVDVGG  G    +I      IK    DLPHV+   P    ++ + G+MF+SIP ADA F K + H + DE C+KIL +C E++A     GK+I+++ +I    ED    E+ +++ +     V    G ER+++++E L    GFS
Sbjct:  112 LCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVP-FKRAH-GMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAK---GGKIILVESLIPVIPEDN--LESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFS 346          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.509e-21
Identity = 67/197 (34.01%), Postives = 99/197 (50.25%), Query Frame = -1
Query:  119 GTVFWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMM-VAVRGSERTEKEWEKLFLDAGFSHFKITPV 706
            G  F+ Y  K    N  +NQAM + S +A   V      F  L  LVDVGGG G+    I    P I+    +LPHV+   PD   ++ + GDMF+ +P A     K + H + D+  +KILK C +A+    + G VI+I+ V+ +   +   +   L  D+LMM +   G ERT  E++ L   AGF+  K  P+
Sbjct:  174 GMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALP---ENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPI 367          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 56/192 (29.17%), Postives = 93/192 (48.44%), Query Frame = -1
Query:  143 FWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPI-FQGLGSLVDVGGGTGSFARIISEAFPGIKCTV-LDLPHVVPKVPDT-----DNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGF 697
            FW+    +P +  ++NQ M   ++ A   +   + I F    ++VD+GG  G     + E +P IK  +  DL  V+     T       L  I G+ F+S+P +D +  K I H +  +DC+KILK   +   S     K+ + +I+I+ +K     ++ +   D+LM   V   ERT  EW++LF  A F
Sbjct:  153 FWELFDLHPQYKDLFNQTMKVYTEAAISNITQSKGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISK---SMKPNAKIHLFEIIIDPRK---GYSKYETYIDILMFQMVNAKERTLDEWKELFELADF 338          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: OMT12_DICDI (O-methyltransferase 12 OS=Dictyostelium discoideum GN=omt12 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 55/194 (28.35%), Postives = 92/194 (47.42%), Query Frame = -1
Query:  143 FWDYMAKNPDFNSIYNQAMASDSQLA--NLIVK-DCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDTDN------LKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGF 697
            FW++   +  +  +++ AM   + L    LI K    P F+   ++VD+GG  G     + E+ P I     DL +++      +       LK ++GD F S+P AD +  K I H + DE C+ IL    +++      GK+ I D+V+    + +  T+  +  D+LMM      ER+  EW +LF   GF
Sbjct:  135 FWEHFETDESYKQLFHNAMKDYTSLIIDRLISKISLSPNFK---TVVDIGGSHGFLIGKLLESNPNIHGINFDLENIINSSTSKNENFQHPRLKHVSGDFFNSVPEADCYILKYILHDWSDEKCITILNNIHKSLK---PNGKLFINDLVL----DPSNYTKEAVFKDILMMQYFDAKERSINEWHQLFEKCGF 318          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 52/188 (27.66%), Postives = 90/188 (47.87%), Query Frame = -1
Query:  143 FWDYMAKNPDFNSIYNQAMASDSQLANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDT---DNLKFIAGDMFQSIPPADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGF 697
            +W+ + KN  + + +N  M   +      +K    + +   ++VD+GG  G     + + +P +     D   V+    +      LK +AGD F+S+P AD +  K I   F DE C ++LK   +++ S     K+II+DI+++  K            D+LMM  + G +R+  EW KLF  +GF
Sbjct:  134 YWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSK-FETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKS---NAKIIILDIILDSSK----YLNFDTYLDILMMETLDGKQRSLSEWIKLFEMSGF 313          
BLAST of CX078058 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.865e-14
Identity = 58/233 (24.89%), Postives = 110/233 (47.21%), Query Frame = -1
Query:   86 DNELSAYETAND---GTVFWDYMAKNPDFNSIYNQAMASDSQ-LANLIVKDCQPIFQGLGSLVDVGGGTGSFARIISEAFPGIKCTVLDLPHVVPKVPDT-------DNLKFIAGDMFQSIP-PADAFFFKAIFHAFVDEDCLKILKRCREAIASRGDRGKVIIIDIVINEKKEDAQLTEAKLLYDMLMMVAVRGSERTEKEWEKLFLDAGFSHFKITPVYGIK--SLIEVYP 742
            D+ +   E A D   GT F+ Y+++ P+ +  +  +M   ++ ++  + K+ +  F   G++VD+GG  GS    +  A PG++  V D P        T       +  +   GD F  +P   D +  K+I H + D     IL+  R A+ +     +++++++++ +   D+       L D+ M+V + G ER+E++   L  D GF   ++    G+   SLIE  P
Sbjct:  147 DHSIRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPA---HARLLVVEVLLPD-TVDSSAHPLGYLSDLYMLVNMGGRERSERDLRSLLSDTGFRTTRVRTPPGLTPFSLIEAAP 375          
The following BLAST results are available for this feature:
BLAST of CX078058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
COMT1_SACOF8.624e-2834.63Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE3.277e-2733.66Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_EUCGL1.626e-2631.20Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
OMT1_ORYSJ1.166e-2431.55Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IMT1_MESCR5.414e-2230.58Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA3.509e-2134.01(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
OMT9_DICDI1.093e-1429.17O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
OMT12_DICDI1.093e-1428.35O-methyltransferase 12 OS=Dictyostelium discoideum... [more]
OMT11_DICDI1.093e-1427.66Probable inactive O-methyltransferase 11 OS=Dictyo... [more]
DMPM_STRAD1.865e-1424.89O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6F11_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6F11-K22-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX078058 ID=CX078058; Name=CX078058; organism=Citrus sinensis; type=EST; length=889bp
GCGAATTTGGGTACCGCGGCCCCCCCTTTTTTTTTTTTTTTTAAATGGAG
AAACGGCCTTTTACTTTTTGTTATTTTTGTATTTAAGGATAGACTTCAAT
AAGGGACTTAATCCCATAAACAGGAGTTATCTTGAAGTGACTGAAACCAG
CATCCAAGAATAGCTTTTCCCATTCTTTCTCAGTCCTCTCACTTCCACGA
ACAGCAACCATCATCAACATGTCGTACAATAGCTTTGCTTCGGTGAGCTG
GGCGTCCTCTTTCTTTTCATTGATCACTATGTCTATGATTATTACCTTTC
CTCTGTCACCTCTGCTTGCAATTGCTTCTCTGCATCTCTTGAGTATCTTC
AAGCAATCCTCATCAACAAATGCATGAAAAATTGCCTTGAAGAAAAACGC
ATCCGCTGGAGGGATAGACTGAAACATGTCGCCTGCTATGAATTTCAAGT
TGTCGGTGTCTGGCACTTTGGGAACAACGTGTGGGAGATCAAGTACCGTG
CATTTTATGCCAGGAAATGCCTCGGATATGATCCTGGCAAAGGATCCTGT
ACCACCACCTACATCAACTAACGAACCTAAGCCCTGGAAAATTGGCTGGC
AGTCCTTAACAATCAAGTTTGCCAGTTGAGAATCACTGGCCATGGCCTGA
TTGTAGATGCTGTTGAAATCAGGGTTTTTTGCCATGTAATCCCAAAAGAC
CGTTCCATCATTCGCAGTTTCATATGCTGAGAGCTCATTGTCTCTGAACC
ACCGACTCAAAAAATGGCATGGATTTACAAAAACTGGGTCAGTCAATGTC
AAAACGACTGGTGATAAACAGTAGGGCTTGTCTTTGAGGAACAGCTTGGA
AGTCAATGTGAGAGCATATGCTTCTTCTTGTTGTTGCTG
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