CX078057
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_CANAW (40S ribosomal protein S1 OS=Candida albicans (strain WO-1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.429e-62 Identity = 117/190 (61.58%), Postives = 153/190 (80.53%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 570 K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR PNQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 55 KNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_CANAL (40S ribosomal protein S1 OS=Candida albicans GN=RPS1 PE=3 SV=3) HSP 1 Score: 238.424 bits (607), Expect = 3.429e-62 Identity = 117/190 (61.58%), Postives = 153/190 (80.53%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 570 K A++GLK RVFEV L DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR PNQ+K+T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 55 KNAADGLKGRVFEVCLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQIKKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 238.424 bits (607), Expect = 3.429e-62 Identity = 123/201 (61.19%), Postives = 159/201 (79.10%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 603 K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G++FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREI+K+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 55 KNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_SUBDO (40S ribosomal protein S3a OS=Suberites domuncula PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 4.479e-62 Identity = 115/180 (63.89%), Postives = 146/180 (81.11%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD 543 K+AS+GLK RVFEVSL DL N+E+ ++RK RL +ED+QGKNVLTNF GM TTDKLR+LV+KW TLIEA VDVKTTD + LRLFCIGFTKR PNQ+K+T YA++SQ R IR+KM ++M + + DLK V K I + IG++IEK SIYPL +VF+RKVK+LK PKFD+G+LM++HG+ Sbjct: 55 KLASDGLKGRVFEVSLADLQNDEQ-SFRKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIGFTKRQPNQIKKTSYAKSSQCRSIRKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKCQSIYPLHDVFVRKVKVLKKPKFDIGRLMDLHGE 233
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2) HSP 1 Score: 236.884 bits (603), Expect = 9.977e-62 Identity = 120/199 (60.30%), Postives = 153/199 (76.88%), Query Frame = 1 Query: 1 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 576 TKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R Sbjct: 55 TKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_FELCA (40S ribosomal protein S3a (Fragment) OS=Felis catus GN=RPS3A PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.977e-62 Identity = 120/199 (60.30%), Postives = 153/199 (76.88%), Query Frame = 1 Query: 1 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 576 TKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R Sbjct: 51 TKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 248
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_BOVIN (40S ribosomal protein S3a OS=Bos taurus GN=RPS3A PE=2 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 9.977e-62 Identity = 120/199 (60.30%), Postives = 153/199 (76.88%), Query Frame = 1 Query: 1 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------EDVGVKVDR 576 TKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + IG++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S ++ G KV+R Sbjct: 55 TKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.303e-61 Identity = 118/190 (62.11%), Postives = 152/190 (80.00%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKV 570 K A++GLK RV EV+L DL E+HAYRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR PNQVK+T YAQ+S++R+IR+KM EIM + ++ L L +K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG LM +HG+ SE+ G KV Sbjct: 55 KNAADGLKGRVIEVNLADLQGSEDHAYRKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYYLRVFAIAFTKRQPNQVKKTTYAQSSKLREIRKKMMEIMQREVSNSTLAQLTQKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGNLMSLHGEGASEEKGKKV 244
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_SALSA (40S ribosomal protein S3a OS=Salmo salar GN=rps3a PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.702e-61 Identity = 118/201 (58.71%), Postives = 153/201 (76.12%), Query Frame = 1 Query: 1 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSEDVGVKVDR 576 T+IAS+GLK RVFEVSL DL N+E A+RK +L +EDVQGKN LTNF GM+ T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++T YAQ Q+RQIR+KM EIM + + DLK +V K I + +G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ +D G KVDR Sbjct: 55 TRIASDGLKGRVFEVSLADLQNDEV-AFRKFKLISEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSSAAKPSGDDTGAKVDR 254
BLAST of CX078057 vs. ExPASy Swiss-Prot
Match: RS3A_CRYNE (40S ribosomal protein S1 OS=Cryptococcus neoformans GN=RPS1 PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.702e-61 Identity = 118/200 (59.00%), Postives = 153/200 (76.50%), Query Frame = 1 Query: 4 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVDRPADEPMPE 600 K A++ LK RV E+SL DL N++E ++RKI+LR EDV GK+ LT+F+GM+FTTDKLRS+VRKW +L+EA+VDVKTTD + LRLF IGFTKR NQVK+T YAQ+SQ+++IR KM EIM +A DLK LV+KF+ E IGREIEKA IYPL NV++RK KI+K PK D+ KL+E HG+ + + G KV + + PE Sbjct: 55 KNANDSLKGRVLELSLADLNNDQEQSFRKIKLRVEDVAGKSCLTSFYGMDFTTDKLRSIVRKWQSLVEAHVDVKTTDGYVLRLFAIGFTKRQSNQVKKTTYAQSSQLKEIRAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAAKGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDANTGSKVVKSGEFVEPE 254 The following BLAST results are available for this feature:
BLAST of CX078057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078057 ID=CX078057; Name=CX078057; organism=Citrus sinensis; type=EST; length=797bpback to top |