CX078056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A2_PICST (40S ribosomal protein S1-B OS=Pichia stipitis GN=RPS1B PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 7.389e-60 Identity = 115/191 (60.21%), Postives = 152/191 (79.58%), Query Frame = -1 Query: 237 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 806 K A++GLK RV EVSL DL E+H+YRKI+LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV+ Sbjct: 55 KNAADGLKGRVVEVSLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKVN 245
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_COCP7 (40S ribosomal protein S1 OS=Coccidioides posadasii (strain C735) GN=RPS1 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.650e-60 Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = -1 Query: 207 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 806 K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 55 KNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_COCIM (40S ribosomal protein S1 OS=Coccidioides immitis GN=RPS1 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.650e-60 Identity = 123/201 (61.19%), Postives = 155/201 (77.11%), Query Frame = -1 Query: 207 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 806 K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 55 KNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.650e-60 Identity = 115/190 (60.53%), Postives = 149/190 (78.42%), Query Frame = -1 Query: 240 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 806 K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 55 KNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 9.650e-60 Identity = 115/190 (60.53%), Postives = 149/190 (78.42%), Query Frame = -1 Query: 240 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 806 K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 55 KNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.150e-59 Identity = 109/187 (58.29%), Postives = 148/187 (79.14%), Query Frame = -1 Query: 249 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVG 809 TK+A++GL+ R++EVSL DL +E+ +YRKI+L ED+QG+N LTNF G + T DKL SL+RK ++LIEA+ DVKTTD +TLR+FCIG+TKR P Q+K TCY ++S+ R +RRKM E+M +A++ ++ +V+K I E IG+EIEKA S++PLQNV IRK+K+LK PKFDL KLMEVH D SE+ G Sbjct: 54 TKLATDGLRGRIYEVSLADLNADEDQSYRKIKLCCEDIQGRNCLTNFHGTSVTRDKLCSLIRKNYSLIEAFTDVKTTDGYTLRMFCIGYTKRRPGQLKSTCYIRSSRTRVVRRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKACKSVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDISEETG 240
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.808e-59 Identity = 121/201 (60.20%), Postives = 155/201 (77.11%), Query Frame = -1 Query: 207 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 806 K A++ LK R+FEVSL DL N++ H++RKI+LR ++VQGKN LTNF GM+FT+DKLRSLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A++ L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFD+G L+ +HG+ S +D G KV+R E + E+ Sbjct: 55 KNANDSLKGRIFEVSLADLQNDQAHSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDIGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.808e-59 Identity = 115/192 (59.90%), Postives = 148/192 (77.08%), Query Frame = -1 Query: 240 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVH--GDYSEDVGVKV 809 TK+A + L+HRV+EVSL DL N+E+ A+RKI+L+ ED+QG+ LT F GM+ T DKL SL+RK+ TLIEA+ +VKT+D + LRLFCI FT+R+ +QVK TCYAQTSQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA I+PLQ+VFIRKVK+L P FD+ +LME H D E+ G KV Sbjct: 54 TKLAVDALRHRVYEVSLADLNNDEDQAFRKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIAFTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQHVFIRKVKVLSKPSFDVSRLMESHVGADGVEEKGTKV 245
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_TRIIF (40S ribosomal protein S3a OS=Triatoma infestans PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.667e-59 Identity = 120/202 (59.41%), Postives = 153/202 (75.74%), Query Frame = -1 Query: 219 TKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--YSEDVGVKVDRP-ADEP 809 TKIASEGLK RVFEVSL DL N+ E +YRK RL AEDVQ +NVLTNF GM+ TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIGFT + ++TCYAQ +Q+RQIRRKM + + + ++ DL+ +V K I + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G KV RP A EP Sbjct: 55 TKIASEGLKGRVFEVSLADLQNDTDAERSYRKFRLIAEDVQARNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVRTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRQIRRKMVDNITSSISNSDLRVVVNKLIPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGSDEPGAKVSRPEAYEP 256
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 3.667e-59 Identity = 115/189 (60.85%), Postives = 147/189 (77.78%), Query Frame = -1 Query: 240 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 806 K A++ LK R+ EVSL DL +EEH++RK++LR ED+QGK+ LT+F G + T+DKLRSLVRKW + IEA +KTTD + R+F IGFT R NQVK+T YAQ+SQIR I +KM +++ QA C +K LV+K I EVIGR IEKAT++IYPLQNVF+RKVKILKAPK D KL+E+HG+ S+DVG KV Sbjct: 55 KNANDSLKGRILEVSLADLQKDEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 242 The following BLAST results are available for this feature:
BLAST of CX078056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078056 ID=CX078056; Name=CX078056; organism=Citrus sinensis; type=EST; length=812bpback to top |