CX078056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.789e-59 Identity = 113/189 (59.79%), Postives = 146/189 (77.25%), Query Frame = -1 Query: 240 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 806 K A++ LK R+ EVSL DL +EEH++RK++LR +DVQGK LT F GM+ T+DKLRSLVRKW T IEA +KTTD + R+F IGFT+R NQ+K+T YAQ+SQIR IR+KM +++ QA C ++ LV+K I E+IGREIEKAT I+PLQNVF+RKVKILK+PK D KL+E HG+ ++DVG KV Sbjct: 55 KNANDALKGRIVEVSLADLQKDEEHSFRKVKLRVDDVQGKACLTTFNGMSMTSDKLRSLVRKWQTTIEADQTIKTTDGYVCRIFVIGFTRRRYNQIKKTTYAQSSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKATGGIFPLQNVFVRKVKILKSPKLDAQKLLEQHGE-AQDVGTKV 242
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A2_DEBHA (40S ribosomal protein S1-B OS=Debaryomyces hansenii GN=RPS1B PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.255e-59 Identity = 114/201 (56.72%), Postives = 153/201 (76.12%), Query Frame = -1 Query: 207 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 806 K A++GLK RV EV L DL E+H+ RK++LR ++VQGKN+LTNF G++FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + EA Sbjct: 55 KNAADGLKGRVVEVCLADLQGSEDHSSRKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSAGFKDVVLEA 255
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A1_DEBHA (40S ribosomal protein S1-A OS=Debaryomyces hansenii GN=RPS1A PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 8.169e-59 Identity = 112/190 (58.95%), Postives = 149/190 (78.42%), Query Frame = -1 Query: 240 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 806 K A++GLK RV EV L DL E+H+ RK++LR ++VQGKN+LTNF G++FTTDKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 55 KNAADGLKGRVVEVCLADLQGSEDHSSRKVKLRVDEVQGKNLLTNFHGIDFTTDKLRSLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_TRIAD (40S ribosomal protein S3a OS=Trichoplax adhaerens GN=TRIADDRAFT_36460 PE=3 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.067e-58 Identity = 117/200 (58.50%), Postives = 150/200 (75.00%), Query Frame = -1 Query: 219 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEP 809 TKIAS+GLK RVFEVSL DL N E A+RK RL AE+V GK+VLTNF GM+ T+DKL+SLV+KW TLIEA++D KTTD + LR F IGFTK+ PNQ+K+T YA+TSQ R IR+KM +I+ + ++ DLK +V + I + IG++IEK+ SIYPL +V+IRKVK+LK PK D KL+E+HG+ S D G V R EP Sbjct: 54 TKIASDGLKGRVFEVSLADLQNGEI-AFRKFRLIAEEVLGKSVLTNFHGMSMTSDKLKSLVKKWQTLIEAHIDAKTTDGYLLRFFAIGFTKKRPNQIKKTAYAKTSQCRSIRKKMTDIITREVSAIDLKEVVNRLIPDSIGKDIEKSCQSIYPLHDVYIRKVKVLKKPKLDTAKLLELHGEGVASSGDAGSAVRRDGYEP 252
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_CAEBR (40S ribosomal protein S3a OS=Caenorhabditis briggsae GN=rps-1 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.377e-58 Identity = 122/202 (60.40%), Postives = 147/202 (72.77%), Query Frame = -1 Query: 213 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPMP 809 TKIASEGLK RVFEVSLGDL N E +RK +L AEDVQGKNVLTNF M+ T DKL S+V+KWHTLIEA VKTTD +TLR+F I FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P Sbjct: 53 TKIASEGLKGRVFEVSLGDL-NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSANQVKKTSYTKTSKIRKIRSEMISCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKIDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.377e-58 Identity = 110/191 (57.59%), Postives = 149/191 (78.01%), Query Frame = -1 Query: 237 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVD 806 K A++GLK R+ EV+L DL E+H+YR ++LR ++VQGKN+LTNF G++FT+DKLRSLVRKW +L+EA V VKT D++ LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ E+ G KV+ Sbjct: 55 KNAADGLKGRIVEVNLADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGESGGEEKGRKVN 245
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 3.104e-58 Identity = 111/187 (59.36%), Postives = 148/187 (79.14%), Query Frame = -1 Query: 240 ASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 800 +++ LK RVFEV+LGDL E++AYRK++LRA++VQG +LTNF GM+FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EI+ + ++ L L K I EVI REIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE+ G KV Sbjct: 45 STDALKGRVFEVNLGDL-TLEDNAYRKVKLRADEVQGNKILTNFHGMDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_USTMA (40S ribosomal protein S1 OS=Ustilago maydis GN=RPS1 PE=3 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 4.054e-58 Identity = 116/205 (56.59%), Postives = 150/205 (73.17%), Query Frame = -1 Query: 207 KIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SEDVGVKV-DRPADEPMPEA 806 K A + LK R+ E SL DL ++E AYRK +L+ + +QG+ LTNF+GM+FT+DKLRSLVRKW +LIEA+ DVKTTD + LR+F I FTK+ NQVK+ YA++S IR IR+KM EI+ +A SCDL+ V K I EVIGRE+EKAT I+PL++V++RKVK+LKAPK DL KL+EVHG +ED GVK + EP P A Sbjct: 54 KNADDSLKGRIVEASLADLNKDDEQAYRKFKLKVDGIQGRTCLTNFYGMDFTSDKLRSLVRKWQSLIEAHQDVKTTDGYLLRVFVIAFTKKRANQVKKNTYAKSSHIRAIRQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKATQGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAPLA 258
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.054e-58 Identity = 119/202 (58.91%), Postives = 148/202 (73.27%), Query Frame = -1 Query: 213 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPMP 809 TKIASEGLK RV+EVSLGDL N E +RK+RL EDVQG+ LTNF GM T DKL S+V+KWHTLIEA V VKT+D + LRLFCIGFTK+ Q+K+T YA++S+IRQIR KM E M + DLK + K + + IG++IEKA S IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P Sbjct: 52 TKIASEGLKGRVYEVSLGDL-NNAESEFRKMRLICEDVQGRTCLTNFHGMRLTRDKLCSIVKKWHTLIEANVAVKTSDGYLLRLFCIGFTKKNARQLKKTSYAKSSKIRQIRAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
BLAST of CX078056 vs. ExPASy Swiss-Prot
Match: RS3A_CAEEL (40S ribosomal protein S3a OS=Caenorhabditis elegans GN=rps-1 PE=1 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 6.916e-58 Identity = 122/202 (60.40%), Postives = 147/202 (72.77%), Query Frame = -1 Query: 213 TKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMNFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGV---KVDRPADEPMP 809 TKIASEGLK RVFEVSLGDL N E +RK +L AEDVQGKNVLTNF M+ T DKL S+V+KWHTLIEA VKTTD +TLR+F I FTK+ NQVK+T Y +TS+IR+IR +M + + CDLK +V K I + IG++IEK S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P Sbjct: 53 TKIASEGLKGRVFEVSLGDL-NNSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252 The following BLAST results are available for this feature:
BLAST of CX078056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 197
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX078056 ID=CX078056; Name=CX078056; organism=Citrus sinensis; type=EST; length=812bpback to top |