CX078040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.386e-43 Identity = 95/205 (46.34%), Postives = 137/205 (66.83%), Query Frame = -3 Query: 186 FLGLVKSSLRPGFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 791 +L +S++ + +QN ++ GAFTGE+SA ML + +VI+GHSERR + E + + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++ LA P+IA + R++YGGSV N L AQ D+DG L+GGASL + FI I ++AE Sbjct: 44 YLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQF-LAKDDPDIAQSLRLLYGGSVKADNAALLFAQSDIDGGLIGGASLTADSFIAICQAAE 247
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_PORGI (Triosephosphate isomerase OS=Porphyromonas gingivalis GN=tpiA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.071e-43 Identity = 95/189 (50.26%), Postives = 127/189 (67.20%), Query Frame = -3 Query: 192 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 749 VAA+NC K+ GA+TGE+SA M+ + +VI+GHSERR +E + + +KV ALS GL I CVGE LE+REAG EVVA Q + + + ++ ++LAYEPVWAIGTGK AT QAQE+H +RK + A E+A I+YGGS N AN KEL ++ DVDG L+GGASL +F+ II++ Sbjct: 62 VAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCNAANAKELFSRADVDGGLIGGASLSVDKFLPIIEA 250
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_PORG3 (Triosephosphate isomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tpiA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.071e-43 Identity = 95/189 (50.26%), Postives = 127/189 (67.20%), Query Frame = -3 Query: 192 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKS 749 VAA+NC K+ GA+TGE+SA M+ + +VI+GHSERR +E + + +KV ALS GL I CVGE LE+REAG EVVA Q + + + ++ ++LAYEPVWAIGTGK AT QAQE+H +RK + A E+A I+YGGS N AN KEL ++ DVDG L+GGASL +F+ II++ Sbjct: 62 VAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCNAANAKELFSRADVDGGLIGGASLSVDKFLPIIEA 250
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 6.944e-43 Identity = 93/178 (52.25%), Postives = 117/178 (65.73%), Query Frame = -3 Query: 219 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 749 V A+NC K GA+TGE+SAEM+ + +VILGHSERR +E E + +KV AL+ LK I C+GE LE+REA EVVAAQ ++ +S I+LAYEPVWAIGTGK AT QAQE+H +R + E+A T I+YGGS +N KEL A PDVDG L+GGA+LK Sbjct: 62 VGAENCADKVSGAYTGEVSAEMVASTGAEYVILGHSERRAYYHETVEILEEKVKLALANNLKPIFCIGEVLEEREANKQNEVVAAQLASVFSLSAEDFSKIILAYEPVWAIGTGKTATAEQAQEIHAFIRSLIADKYGKEVADNTSILYGGSCKPSNAKELFANPDVDGGLIGGAALK 239
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43 Identity = 98/184 (53.26%), Postives = 116/184 (63.04%), Query Frame = -3 Query: 219 GFHVAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKA----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 758 G + AQN V GAFTGEIS EML ++ +VILGHSERR + E NE V KVA A GL I CVGETLEQREA TM+V+ Q A + + +V+AYEPVWAIGTGKVA+ AQAQE H +R L +A A RI+YGGS+ N KEL Q DVDG L+GGA+LK Sbjct: 59 GVDLGAQNMAVASSGAFTGEISGEMLKDVGCSYVILGHSERRTLFGETNEQVAQKVASAYRDGLTPILCVGETLEQREAEQTMQVLEQQLLACLPVLPADAAKQQQLVVAYEPVWAIGTGKVASTAQAQEAHAFIRGLLAKELGANVADAVRILYGGSMKPDNAKELLGQADVDGGLIGGAALK 242
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_JANMA (Triosephosphate isomerase OS=Janthinobacterium sp. (strain Marseille) GN=tpiA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.184e-42 Identity = 97/190 (51.05%), Postives = 122/190 (64.21%), Query Frame = -3 Query: 189 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 749 + AQ+ + GA+TGE+S ML + +VI+GHSERR E NE + K AL+ GL I CVGETL+QREAG T VVA Q + + S + IV+AYEPVWAIGTGK ATPA AQEVH LRK L A + E A RI+YGGS+ N KEL A D+DG L+GGA+LK +F+ I+ +A Sbjct: 60 LGAQDVSSHEAGAYTGEVSTSMLQEFDCRYVIVGHSERRAYFAETNELIAQKTVRALNAGLTPIVCVGETLDQREAGQTDSVVAEQLNVVLASIAASDLAKIVVAYEPVWAIGTGKTATPAMAQEVHAMLRKQLQAKNA-EAAMQVRILYGGSMKPENAKELLAMSDIDGGLIGGAALKAADFLAIVHAA 248
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.020e-42 Identity = 95/188 (50.53%), Postives = 123/188 (65.43%), Query Frame = -3 Query: 189 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 749 + AQNC + GA+TGE+SA ML VI+GHSERR E N V +V AL++GL VI CVGETL +RE+G T ++V+AQ + VS SN+V+AYEPVWAIGTGK AT AQA+EVH +R + A A RI YGGSV +N EL A P++DG L+GGASL +F+ I+++A Sbjct: 62 LVAQNCHYENDGAYTGEVSAAMLKGAGCSSVIIGHSERRQFFGETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFAMPNIDGGLIGGASLNAADFVAIVQAA 249
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_BACTN (Triosephosphate isomerase OS=Bacteroides thetaiotaomicron GN=tpiA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.020e-42 Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = -3 Query: 219 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 749 V A+NC K GA+TGE+SAEM+ + +VILGHSERR E + +KV AL+ GL I C+GE LE+REA EVVAAQ +++ +S I+LAYEPVWAIGTGK A+P QAQE+H +R + EIA T I+YGGS +N KEL + PDVDG L+GGA+LK Sbjct: 62 VGAENCADKASGAYTGEVSAEMVASTGAKYVILGHSERRAYYGETVAILEEKVKLALANGLTPIFCIGEVLEEREANKQNEVVAAQMESVFSLSAEDFSKIILAYEPVWAIGTGKTASPEQAQEIHAFIRSIVADKYGKEIADNTSILYGGSCKPSNAKELFSNPDVDGGLIGGAALK 239
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_HAHCH (Triosephosphate isomerase OS=Hahella chejuensis (strain KCTC 2396) GN=tpiA PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.446e-42 Identity = 94/188 (50.00%), Postives = 121/188 (64.36%), Query Frame = -3 Query: 189 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 749 + +QNC + GA+TGE+SA+M +++ WVILGHSERR + E +E + KV A+ GL I CVGETL RE+G EV Q A+ V + V+AYEPVWAIGTGK A+P AQ +H LR + P+IA RI+YGGSV +N KEL + PDVDG LVGGASL EF+ II++A Sbjct: 60 LGSQNCSATEDGAYTGEVSAKMCADMKCSWVILGHSERRALYAENDEVIACKVKRAVESGLAPILCVGETLADRESGRAEEVTLKQLDAVFMSVQPDDSWVVAYEPVWAIGTGKTASPEDAQSMHKALRN-NIRKHFPQIADKIRILYGGSVKSSNAKELFSMPDVDGALVGGASLVSEEFVSIIEAA 246
BLAST of CX078040 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.501e-42 Identity = 97/192 (50.52%), Postives = 120/192 (62.50%), Query Frame = -3 Query: 183 VAAQNCWVKKGGAFTGEISAEMLVNLEIPWVILGHSERRLILNELNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMEVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLLANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAEL 749 + AQN GAFTGEISA ML I+GHSERRL+ E NE V + A+ LK I CVGETLEQRE G T+ V+ AQ + + V S + V+AYEPVWA+GTG+ AT QAQEVH+ +R L+A +PE+A A +IIYGGSV N EL A PD+DG L+GGASL F+ I S + Sbjct: 60 LGAQNVADHNSGAFTGEISAGMLREFGCELAIVGHSERRLLYGESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFAMPDIDGGLIGGASLDARAFLSICHSVSV 250 The following BLAST results are available for this feature:
BLAST of CX078040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX078040 ID=CX078040; Name=CX078040; organism=Citrus sinensis; type=EST; length=868bpback to top |