CX077973

Overview
NameCX077973
Unique NameCX077973
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length706
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_SALHS (Adenine phosphoribosyltransferase OS=Salmonella heidelberg (strain SL476) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 44/83 (53.01%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP+KLP E I+E Y+LEYG   +E+HV A++ G+  L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYALEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_LEPIN (Adenine phosphoribosyltransferase OS=Leptospira interrogans GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 44/81 (54.32%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 423
            GI+ARGF+ G P+A+ +G  F+P+RK  KLP E +SEEY LEYGK V+E+H  ++Q G++ L++DDL+A GGT+ AA++LL
Sbjct:   55 GIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLL 135          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_LEPIC (Adenine phosphoribosyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 44/81 (54.32%), Postives = 64/81 (79.01%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 423
            GI+ARGF+ G P+A+ +G  F+P+RK  KLP E +SEEY LEYGK V+E+H  ++Q G++ L++DDL+A GGT+ AA++LL
Sbjct:   55 GIEARGFLTGAPLAFQLGVGFIPIRKKGKLPSETVSEEYDLEYGKDVIEVHKDSIQPGDKILLMDDLIATGGTMIAAVKLL 135          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ESCF3 (Adenine phosphoribosyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ENT38 (Adenine phosphoribosyltransferase OS=Enterobacter sp. (strain 638) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 44/83 (53.01%), Postives = 63/83 (75.90%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP+KLP E I+E Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALEMGVGFVPVRKPRKLPRETIAESYELEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ECOUT (Adenine phosphoribosyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=apt PE=3 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ECOSM (Adenine phosphoribosyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ECOSE (Adenine phosphoribosyltransferase OS=Escherichia coli (strain SE11) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ECOLU (Adenine phosphoribosyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=apt PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
BLAST of CX077973 vs. ExPASy Swiss-Prot
Match: APT_ECOLI (Adenine phosphoribosyltransferase OS=Escherichia coli (strain K12) GN=apt PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20
Identity = 45/83 (54.22%), Postives = 62/83 (74.70%), Query Frame = 1
Query:  181 GIKARGFIFGPPIAWAIGAKFVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGR 429
            G +ARGF+FG P+A  +G  FVP+RKP KLP E ISE Y LEYG   +E+HV A++ G++ L+VDDL+A GGT+ A ++L+ R
Sbjct:   62 GTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRR 144          
The following BLAST results are available for this feature:
BLAST of CX077973 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SALHS2.039e-2053.01Adenine phosphoribosyltransferase OS=Salmonella he... [more]
APT_LEPIN2.039e-2054.32Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_LEPIC2.039e-2054.32Adenine phosphoribosyltransferase OS=Leptospira in... [more]
APT_ESCF32.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia f... [more]
APT_ENT382.039e-2053.01Adenine phosphoribosyltransferase OS=Enterobacter ... [more]
APT_ECOUT2.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOSM2.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOSE2.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOLU2.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia c... [more]
APT_ECOLI2.039e-2054.22Adenine phosphoribosyltransferase OS=Escherichia c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6B07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6B07-C14-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077973 ID=CX077973; Name=CX077973; organism=Citrus sinensis; type=EST; length=706bp
TTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAATCGATCAGAA
AAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAATTGGACACCCA
TTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAAGTTGTTCAGC
GAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAGCTAGGGGTTT
TATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCAAAGTTTGTTCCTA
TGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGAAGAGTATTCC
TTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTGCTGTACAAGC
AGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATTGGTGGGACCT
TGTCTGCTGCAATCAGGCTACTTGGTCGCTTTGTAAGTTTTAATTTTCAT
TTAGAGCGCTGTCAGAAGATGGTATTGTTACTGGAATTTTCACTGGAAGT
CTTACTAGAAGTCTTGTTGTTGGAGTACTTGCATTAATCTTTGGAAGTTT
TGTTGGGTAACTTGGCTTGGTGGCCGGAATTCTTATTGATTTTCTTAGAG
TTTGATTGGAATTTAACCGTCATTTAATACTTTAGGATGATTTTTTTCAA
TTTGGGATATTTTACTATGTGTTGGTGGTGATCACATTGGATATTAGATT
TATTTT
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