CX077970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.039e-33 Identity = 82/222 (36.94%), Postives = 131/222 (59.01%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 668 D ++AKA GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGE-AELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSA_THEK1 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.749e-33 Identity = 81/223 (36.32%), Postives = 129/223 (57.85%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 671 D ++AKA GA IV +L D+G A + E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ L + + + G E E A A + IP+TLA+N G++ + + + +H N IGID G +DM E I + VK Q K+A EAA M+LRIDD+++ K P GQ P Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA--KATKPEGGQGGGMP 538
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSA_PYRKO (Thermosome subunit alpha OS=Pyrococcus kodakaraensis GN=thsA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.749e-33 Identity = 81/223 (36.32%), Postives = 129/223 (57.85%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKP 671 D ++AKA GA IV +L D+G A + E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++++++ ++P GGA E+ ++ L + + + G E E A A + IP+TLA+N G++ + + + +H N IGID G +DM E I + VK Q K+A EAA M+LRIDD+++ K P GQ P Sbjct: 320 DMEKLAKATGAKIVTNVKDLTPEDLGY-AEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAA--KATKPEGGQGGGMP 538
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.322e-32 Identity = 79/228 (34.65%), Postives = 133/228 (58.33%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETE 686 D ++A+A G +V+ DEL D+G A L E +K+G++ F+ K+PKA ++L+RG + +++E ER L+DA+ ++I++ + V GGGA EL ++ L++ + I G E+ EA A A E + L +N G + I + L+ H N N W GI+ TG + DM + + + VK K A EAA ++LRIDD+++ KK ++ G G++ S+ + E + Sbjct: 327 DLEKLARATGGRVVSNIDELTPQDLGYAA-LVEERKVGEDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIAAGKKSESKG-GESKSEEKKEED 552
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 2.255e-32 Identity = 81/227 (35.68%), Postives = 135/227 (59.47%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAI-SDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIE 680 D ++AKA GA IV +L+ +G A L E +K+G++ FI K+PK+ T+LLRGA+ LL+E ERN++DA+ RNI++ PK+V GGGA E+ ++ LK+ + ++ G ++ EA A A E IP LA++ G++ + + L+ H+ G + G++ G I DM + +++ VK Q K+A EAA +L+IDD+++ K+ G+ + + E Sbjct: 322 DIEKVAKATGAKIVTSLRDLKPEYLGY-AELVEERKVGEDKMVFIEGAKNPKSVTILLRGANDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLHSQGYK-FAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIAAAPPKKKEKKGKTGEEEEEE 546
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 3.256e-31 Identity = 78/232 (33.62%), Postives = 129/232 (55.60%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 698 D ++A+A G +V+ DEL D+G A L E +KIG++ FI K+PKA ++L+RG + +++E ER L+DA+ +++++ + + GGGA E ++ L++ + + G E+ EA A A E++ L +N G + I + L+ H N N W GI+ TG I DM + + VK K A EA+ ++LRIDD++S KK + G+ K + E + D Sbjct: 327 DLEKLARATGGRVVSNIDELTSQDLGY-ATLVEERKIGEDKMVFIEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLISAGKKSE----GKTGEKKESEKGKEED 553
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPH_TETPY (T-complex protein 1 subunit eta OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.256e-31 Identity = 82/229 (35.81%), Postives = 124/229 (54.15%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA--NGENAWIGIDGN-TGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ--APGSGQAPSKPQ 674 D R+ KA G+++ + L + +GT G+FE ++IG E + DC K+ T++LRG ++ + E ER+L DA+ + R +K K+VPGGGA EL +S L+ S EG + A A A E IP+T+A N G + I+ + L+ KHA + ++ G+D N I + E +W+ V+ F A EAAC +L ID+ V K +Q AP G PQ Sbjct: 318 DIKRVQKATGSIVQTTVNGLSQDVLGT-CGMFEEQQIGAERYNLFQDCPHSKSATIILRGGAEQFIAEAERSLNDAIMIVRRCMKANKIVPGGGAIELEISRLLRLHSRKTEGKVQLVINAFAKALEVIPKTIADNAGHDSIQVLNKLRQKHALESDQSKNFGVDINAVDGIGNNFENFVWEPIIVRKNAFSAATEAACTILSIDETVRNPKSEQPKAPPGGLRRGGPQ 545
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31 Identity = 79/222 (35.59%), Postives = 131/222 (59.01%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 668 D ++AKA GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ ++ ++ + + + G E+ EA A A + IPRTLA N G++ I T+ + H + IG+D G +DM E + V Q K+A +AA M+LRIDD+++ K ++ G+ ++ Sbjct: 320 DMEKLAKATGAKIVTNVRDLTPEDLGE-AELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSA-KAAIMILRIDDVIAASKLEKDKEGGKGGTR 538
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31 Identity = 75/230 (32.61%), Postives = 130/230 (56.52%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 692 D ++A+A G +++ DEL D+G A L E +K+G++ F+ K+PK+ ++L+RG + +++E ER L+DA+ ++I++ + V GGGA E+ ++ L++ + + G E+ EA A A E + LA+N G++ I + L+ H N N W G++ TG DM + + + VK K A EA ++LRIDDIV+ KK + SG+ + ++ D Sbjct: 326 DLEKLARATGGRVISNIDELTSQDLGYAA-LVEERKVGEDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVAAGKKSGSEPSGKKEKDKEEKSSED 554
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 5.553e-31 Identity = 73/206 (35.44%), Postives = 128/206 (62.14%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 620 D R+++A GA V+ ++++ +D+G AG K IG + F+ D ++ K+ T++LRG ++ +++EVER ++D++ V R +++ +++PGGGA E ++ L+ + S+ G E+ EA A A E IPRTLA+N G + I ++ L+ +H G+ G+D G + DM+ I + VK Q ++A EAA M+LRIDD+++ Sbjct: 317 DFTRLSRATGATPVSNVNDIEAADLGA-AGSVAQKDIGGDERIFVEDVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQHDGGDTE-AGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIA 520 The following BLAST results are available for this feature:
BLAST of CX077970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077970 ID=CX077970; Name=CX077970; organism=Citrus sinensis; type=EST; length=815bpback to top |