CX077970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 77/216 (35.65%), Postives = 122/216 (56.48%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISD-MKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAP 644 D +++A GA I + + ESD+G A L EV+ +G + FI K KA TV+++G++ + +E ER+L DA + RN++ P +V GGGA E ++ L+ + + G E+ + A A A E L++ G++ I +T ++ KHA G +NA GID I D M E ++ D+ VK Q K+A EAA +L+IDD+++ KQ P Sbjct: 314 DIELLSRATGAKIASSMKDANESDLGE-AKLVEVRNLGKNKYLFIQSDK-AKAVTVIIKGSNNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKHATGLKNA--GIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMIAAAPAKQQP 525
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26 Identity = 66/202 (32.67%), Postives = 114/202 (56.44%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R++ ACG V VN ++L +G AGL +G+E + FI DC +P++ T+L++G +K L +++ ++D + +N I++ +VPG GA E+ ++ L +I+G + +A A A IP+ LAQN G ++ T+ +Q +H+N + +GID NTG + +WD Y VK Q + A +L +D+I+ Sbjct: 323 RLSLACGGVAVNSVEDLSVDCLGH-AGLVYEYTLGEEKYTFIEDCINPRSVTLLVKGPNKHTLTQIKDAVRDGLRAIKNAIEDGCVVPGAGAVEVVIAEALVTYKHTIQGRARLGVQAFADALLIIPKVLAQNSGYDLQETLVKVQAEHSNSKQP-VGIDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25 Identity = 66/202 (32.67%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG V +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + RN I + +VPG GA E+ ++ L + S++G + +A A A IP+ LAQN G ++ T+ +Q +H+ +G+D NTG E +WD Y VK Q + A +L +D+I+ Sbjct: 323 RLTLACGGVALNSFDDLSPDQLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE-SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25 Identity = 71/221 (32.13%), Postives = 118/221 (53.39%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHA-NGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAP 662 D R A A GA++ L + +GT G+FE +IG+E + +C K+ T++LRG +K + EVER++ DA+ + I N ++VPG G+ E+ +S L+ S SI E+ + A A E+IPR L+ N G + + L+ KH+ + W G+D G I + + I++ +K +A EAAC++L ID+ + A G+ ++P Sbjct: 320 DLKRTANATGALVQTSLFNLNDDVLGT-CGVFEEVQIGNERYNIFKECLKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYSRSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSDIWYGVDCMEGDIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIK--NPSSAAGTQRSP 537
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 2.044e-25 Identity = 65/196 (33.16%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 33 AVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 620 A +V D E+DV G+ + DE F + + T+LLRG++ +++E+ER + DA+ V+ + + +++PGGGATE+ V++ L+ + S+ G E+ EA A + E +PR LA+N G++ I T+ L+ H N ++ IG++ +G + D E + + + K Q +A EAA ++L+IDDI+S Sbjct: 334 ASVVTDLDAASEADVVAGS---VTRDSDDELFYVEGESEQAHGVTLLLRGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIIS 526
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_BOVIN (T-complex protein 1 subunit zeta OS=Bos taurus GN=CCT6A PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25 Identity = 65/202 (32.18%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG + +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G + +A A A IP+ LAQN G ++ T+ +Q +H+ +G+D NTG E IWD Y VK Q + A +L +D+I+ Sbjct: 323 RLTLACGGIALNSLDDLNPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25 Identity = 68/202 (33.66%), Postives = 109/202 (53.96%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG + VN + L E +G +FE +G+E F FI DC +P + T+L++G +K L +++ L+D + +N I++ +VPG GA E+ ++ L ++G + +A A A IP+ LAQN G ++ T+ +Q KHA + +GID NTG E IWD Y VK + A +L +D+I+ Sbjct: 323 RLTLACGGLAVNSFEGLSEECLGHAGLVFEYA-LGEEKFTFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPKVLAQNSGYDLQETLIKIQTKHAESKEL-LGIDLNTGEPMAAAEAGIWDNYCVKKHLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPE_DICDI (T-complex protein 1 subunit epsilon OS=Dictyostelium discoideum GN=cct5 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25 Identity = 70/222 (31.53%), Postives = 123/222 (55.41%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG----DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 656 D +IA A G IV R +++ +G AGL V+++G + + I DC + A T+ +RG +K ++ E +R++ DA+ V RN+I++ +++ GGG++E++ + + I IE++ A A A +AIP LA+N G+ I +++ ++ +N +GID N +DMK ++D K Q F A + M+L+IDDI+ K PG+ + Sbjct: 325 DLEKIAMATGGRIVARFEDVSADKLGR-AGL--VREVGFGTTQDRYLSIEDCPNTNAVTIFVRGGNKMIVEEAKRSIHDALCVTRNLIRDNRVIYGGGSSEISCGLKISAMADDIASIEQYAVRAFADALDAIPLALAENSGLPSIESLSTVKAMQIKEKNPRLGIDCNHRDTNDMKAQHVFDTLPGKTQQFLLANQVVKMILKIDDII-----KMGPGADE 538
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.947e-25 Identity = 68/202 (33.66%), Postives = 113/202 (55.94%), Query Frame = 3 Query: 15 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIG--DEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 614 +A A A IV R EL + +GT AGL G + I C + KA T+ +RG +K +++E +R L DA+ V RN++++ ++V GGG+ EL + + +++ I+GIE++ + A A A E+IP LA+N G+ I ++ L+ K + +GID +DMKE K+ + K + A + M+L+IDD+ Sbjct: 332 LAIATNARIVPRFSELSKEKLGT-AGLVREITFGAAKDRMLSIEQCPNNKAVTIFVRGGNKMIIDEAKRALHDALCVIRNLVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPIDALSDLKAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 114.39 bits (285), Expect = 7.767e-25 Identity = 65/202 (32.18%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG V +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G + +A A A IP+ LAQN G ++ T+ +Q +H+ +G+D NTG E +WD Y VK Q + A +L +D+I+ Sbjct: 323 RLTLACGGVALNSFDDLSPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSE-SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522 The following BLAST results are available for this feature:
BLAST of CX077970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077970 ID=CX077970; Name=CX077970; organism=Citrus sinensis; type=EST; length=815bpback to top |