CX077970
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_DICDI (T-complex protein 1 subunit zeta OS=Dictyostelium discoideum GN=cct6 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24 Identity = 65/206 (31.55%), Postives = 115/206 (55.83%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 629 R+ ACG +N ++L +G ++E + +G+E + F+ K+P +CTVL++G +K + +++ L+D + +N I++ +VPGGGA ++ A L + +I G K +A A A +P+TLAQN G + + T+ LQ ++A G +G+D +G D I+D Y+V Q ++++ A LL ID+I+ K Sbjct: 325 RLTLACGGTAMNSLEDLTPDCLGHADLVYE-QTLGEEKYTFVEGVKNPFSCTVLIKGPTKHQIEQIKDALRDGLRAVKNTIEDKCVVPGGGAFQIAAYADLMKFKETITGRTKLGIQAFADALLVVPKTLAQNSGFDPMDTIIKLQEEYAKGH--IVGLDVESGEPMDPVSEGIFDQYSVLKQVYRSSPVIASQLLLIDEIIKAGK 527
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24 Identity = 64/202 (31.68%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG +N ++L +G AGL +G+E + FI C +P++ T+L+RG +K L +++ ++D + +N I++ ++PG GA E+ V+ L + +++G + +A A A IP+ LAQN G + T+ +Q +HA G+D NTG IWD YNVK Q + A +L +D+I+ Sbjct: 322 RLTLACGGTAMNSVEDLTPDCLGH-AGLVYEYTLGEEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAVANALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQNSGYDPQETLVKVQAEHAE-SGQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHSCTVIASNILLVDEIM 521
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24 Identity = 65/202 (32.18%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R++ ACG + VN ++L +G AGL +G+E F FI +C +P + T+L++G +K L +V+ ++D + +N I++ +VPG GA E+ ++ L +SI+G + +A A A IP+ LAQN G + T+ +Q +H + +G+D NTG + +WD Y VK Q + A +L +D+I+ Sbjct: 323 RLSLACGGMAVNSFEDLTVDCLGH-AGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQL-VGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24 Identity = 68/210 (32.38%), Postives = 114/210 (54.29%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQA 641 R+A G IV+ D Q + G+ L E IG++ K +AC+V+LRGA++ +L+E ER+L DA+ V +K K V G GA+E+ +S+ + ++ + G E EA A +P + N G++ +T L+ +HANG + +GID G ++D+ + + ++YNVK +A EA +LR+DDI+ + +A Sbjct: 316 RLALVLGGEIVSTFDSPQTAQFGS-CDLIEEIMIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAELVTRLRAEHANGRHN-MGIDIEKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDDIIKAAPRARA 523
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 6.575e-24 Identity = 63/202 (31.19%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 12 RIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 R+ ACG + +N D+L +G AGL +G+E F FI C +P++ T+L++G +K L +++ ++D + +N I + +VPG GA E+ ++ L + S++G + +A A A IP+ LAQN G ++ T+ +Q +H+ +G+D +TG E +WD Y VK Q + A +L +D+I+ Sbjct: 323 RLTLACGGIALNSFDDLNPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLVKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVALAEALIKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLSTGEPMVAAEMGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 6.575e-24 Identity = 62/178 (34.83%), Postives = 104/178 (58.43%), Query Frame = 3 Query: 99 EVKKIGDEFFAFIVDCKDP-KACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 629 E+ GD + ++P A ++LLRG++K +L E +R++ DA+ V R ++K L+PGGGA E+ ++ L+ + + G ++ + A A A E IP TLA+N G++ I T+T L+ HANG +++ G++ G ++DM E + V A K A E +L+IDDIV ++ Sbjct: 364 EIPTGGDGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNHANGNSSY-GVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMAVR 540
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23 Identity = 67/232 (28.88%), Postives = 120/232 (51.72%), Query Frame = 3 Query: 3 DNNRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD-EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANG-ENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEAD 692 D R+ K GA + + + ++G ++ + ++GD + F + +D T++LRG++ +L++++ER + D ++ + + ++ +LVPGGGATE+ ++ + + G+E++ + A AFEAIPR LA+N GV ++ L H G +N + I+ A+ DM E I D Y K K A AA +LR+D I+ P G P + + + D Sbjct: 320 DLRRLCKTVGATALPKLTPPVQEEMGHCDSVY-LSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYSVHQEGNKNVGLDIEAEVPAVKDMLEASILDTYLGKYWAIKLATNAAVTVLRVDQIIMA-----KPAGGPKPPSGKKDWDDD 545
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23 Identity = 65/203 (32.02%), Postives = 115/203 (56.65%), Query Frame = 3 Query: 15 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIV 617 IA A IV R ++L +G+ AG+ G + I C + +A TV +RG++K +++E +R L DA+ V RN+I++ ++V GGGA E++ S + +++ I GI+++ A A A + IP LA+N G++ I +TA++ +H A++GID +DM++ + D K Q A + M+L+++DI+ Sbjct: 335 IAIATNGRIVPRFEDLSSDKLGS-AGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDII 536
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.913e-23 Identity = 67/202 (33.17%), Postives = 110/202 (54.46%), Query Frame = 3 Query: 15 IAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGD--EFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 614 IA A G IV R EL +G AG+ + G + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ A A A E IP L++N G+N I+TMT ++ + N +GID +DM+ + + K Q A + M+L+IDDI Sbjct: 333 IAIATGGRIVPRFSELTSEKLGF-AGVVQEISFGTTKDKMLVIEKCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533
BLAST of CX077970 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.499e-23 Identity = 65/201 (32.34%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 15 IAKACGAVIVNRPDELQESDVGTGAGLFEVK-KIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDI 614 IA A G IV R EL +G + E+ + I CK+ +A T+ +RG +K ++ E +R+L DA+ V RN+I++ ++V GGGA E++ + + Q++ +E++ A A A E IP L++N G+N I+TMT ++ + N +GID +DM+ + + K Q A + M+L+IDDI Sbjct: 333 IAIATGGRIVPRFSELTSEKLGFAGVVREISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKESNPALGIDCLHKGSNDMQYQHVIETLIGKKQQISLATQMVRMILKIDDI 533 The following BLAST results are available for this feature:
BLAST of CX077970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX077970 ID=CX077970; Name=CX077970; organism=Citrus sinensis; type=EST; length=815bpback to top |