CX077969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.132e-34 Identity = 83/211 (39.34%), Postives = 127/211 (60.19%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 886 A GA IV D+L S +G A E +KIGD+ F++ CK+PKA ++L+RG + +++EVER L DA+ V ++ K + GGGA E ++ L + ++S+ G E+ EA A A E IPRTLA+N G++ I T+ L+ +H G + +G+D + + DMK + D VK ++A+E A M+LRIDD+++ KK P SGQ Sbjct: 324 ATGAKIVTDLDDLTPSVLGE-AETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEHEKGRIS-VGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIA--SKKSTPPSGQ 530
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THS_PYRHO (Thermosome subunit OS=Pyrococcus horikoshii GN=ths PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33 Identity = 82/225 (36.44%), Postives = 131/225 (58.22%), Query Frame = -1 Query: 212 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 886 A GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++ GGGA+E+ +S L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IGID G +DM E + + VK Q K+A EAA M+LRIDD+++ K ++ + + +D D Sbjct: 327 ATGAKIVTNIRDLTPEDLGE-AELVEERKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAIKVVKDILEDGKIIAGGGASEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGQTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAASKLEKEKEGEKGGGSEEFSGSSDLD 549
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33 Identity = 84/226 (37.17%), Postives = 131/226 (57.96%), Query Frame = -1 Query: 212 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK-KKQAPGSGQAPSKPQIETEADAD 886 A GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++ GGGA E+ +S L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IGID G +DM E + + VK Q K+A EAA M+LRIDD+++ K +K+ G + +D D Sbjct: 327 ATGAKIVTNIRDLTPEDLGE-AELVEERKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDILEDGKIIAGGGAAEIELSIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGIDVYEGEPADMMERGVIEPVRVKKQAIKSASEAAIMILRIDDVIAAQKLEKEKEGEKGGGGSEDFSSSSDLD 550
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33 Identity = 80/205 (39.02%), Postives = 121/205 (59.02%), Query Frame = -1 Query: 272 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQ 886 A GA IV ++L+ D+G A L E +K+G++ FI K+PK+ T+LLRG + L++E ER+L DA+SV + I + K+V GGGA E V+ L + +S + G + EA A A EA+P+ LA N G + I + L+ H EN W G+D +TG I DM + + VK K A E A ++LRIDD+++ K+++ Sbjct: 334 ATGARIVTDIEDLRPEDLGY-AELVEERKVGEDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIAARKEEE 537
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.046e-33 Identity = 78/199 (39.20%), Postives = 126/199 (63.32%), Query Frame = -1 Query: 290 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 886 A GA +V D+L D+G ++E KKI DE FI +C+DPKA +++LRG++K + E+ER L+DA+ V + +++ ++V GGGA E+ ++ L++ + +I G E+ A A A E +P+TLA+N G++ I + L+ H E+ ++GID G I DMKE + + VK Q ++A EAA M+LRIDD+++ Sbjct: 320 ATGARLVTNIDDLTAEDLGEAGVIYE-KKIFDEVLTFIEECRDPKAISIILRGSTKHVAEEMERALEDAIGVVASTLEDREVVAGGGAPEVEIARKLREYADTISGREQLAVSAFADALEIVPKTLAENAGLDSIDVLVDLRAAHE--ESPYMGIDVFDGNIVDMKEAGVIEPQRVKKQAIQSAAEAAEMILRIDDMIA 515
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.156e-32 Identity = 79/211 (37.44%), Postives = 122/211 (57.82%), Query Frame = -1 Query: 254 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQ 886 A GA IV + D+L D+G AGL E +K+ + F+ CK PKA T+L RG+++ ++ EV R + DA+ V + ++ K+V GGGATE+ ++ L++ + S+ G E+ +A A A E IPRTLA+N G++ I + L+ H G+D G + DM E + + VK Q +A EA+ MLLRIDD+++ K K G+ Sbjct: 324 ATGARIVTKIDDLTPEDLGE-AGLVEERKVAGDAMIFVEQCKHPKAVTILARGSTEHVVEEVARAIDDAIGVVKCALEEGKIVAGGGATEIELAKRLRKFAESVAGREQLAVKAFADALEVIPRTLAENSGLDPIDMLVKLRAAHEKEGGEVYGLDVFEGEVVDMLEKGVVEPLKVKTQAIDSATEASVMLLRIDDVIAAEKVKGDEKGGE 533
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.972e-32 Identity = 74/199 (37.19%), Postives = 127/199 (63.82%), Query Frame = -1 Query: 290 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVS 886 A G +V+ D+++ D+G AG K +G + F+ D +D K+ T++LRG ++ +++E+ER ++D++ V R +++ K++PGGGA E +S L++ + S+ G E+ EA A A + IPRTLA+N G++ I ++ L+ +H GE A G+D TG + DM+E + + VK Q ++A EAA M+LRIDD+++ Sbjct: 325 ATGGRVVSSLDDIEADDLGF-AGSVGQKDVGGDERIFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRHDGGEFA-AGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIA 521
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 9.789e-32 Identity = 80/215 (37.21%), Postives = 126/215 (58.60%), Query Frame = -1 Query: 242 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSK 886 A GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K+V GGA E+ +S L + + + G E+ EA A A + IPRTLA+N G++ I T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K ++ G+ S+ Sbjct: 327 ATGAKIVTNVRDLTPEDLGE-AELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELSIRLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPIETLVKVIAAHKE-KGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSASEAAIMILRIDDVIAASKLEKDKEGGKGGSE 539
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.181e-31 Identity = 76/202 (37.62%), Postives = 121/202 (59.90%), Query Frame = -1 Query: 281 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIK 886 A GA IV +L D+G A L E +K+ E F+ CK+PKA T+L+RG ++ +++EVER L+DA+ V ++I+++ K++P GGA E+ ++ L + + + G E+ EA A A + IPRTLA+N G++ + T+ + H + IG+D G +DM E + V Q K+A EAA M+LRIDD+++ K Sbjct: 327 ATGAKIVTNVRDLTPEDLGE-AELVEQRKVAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKILPAGGAPEIELAIKLDEYAKEVGGKEQLAIEAFAEALKVIPRTLAENAGLDPVETLVKVIAAHKE-KGPTIGVDVFEGEPADMMEKGVIAPLRVPKQAIKSASEAAIMILRIDDVIAASK 526
BLAST of CX077969 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.181e-31 Identity = 77/225 (34.22%), Postives = 131/225 (58.22%), Query Frame = -1 Query: 212 ACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARNIIKNPKLVPGGGATELTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGIDGNTGAISDMKEGKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGSGQAPSKPQIETEADAD 886 A GA IV+ DE+ SD+GT + +VK +G+++ F+ CK+PKA ++L+RG ++ +++E+ER++ D++ V + +++ GGGAT ++ L+ + I G ++ E A A E IPR LA+N G++ I + L+ +HA G N GI+ TG I DM + + + V Q ++A EAA M+LRIDD+++ ++ S P K +E+ D Sbjct: 325 ATGASIVSTIDEISSSDLGTAERVEQVK-VGEDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKG-NKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA----TKSSSSSSNPPKSGSSSESSED 543 The following BLAST results are available for this feature:
BLAST of CX077969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 147
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077969 ID=CX077969; Name=CX077969; organism=Citrus sinensis; type=EST; length=886bpback to top |