CX077957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = -3 Query: 197 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNR 802 +FQ+EYA +AV T +GIK DG+V+ V+K I S+++ S +I + H G A +GL AD R +V RA+ EA Y E I V+ +++++ + T Y +RP+G +++ G D + P+L+ +PSG Y AIG GR A E +M ++ +Y E K A LE+ V E + Sbjct: 22 LFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKA-AEGKFDAGTLEVGVVSLEDKK 222
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 62/207 (29.95%), Postives = 108/207 (52.17%), Query Frame = -3 Query: 182 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKV 802 ++Q+EYA +AV T +GIK DG+V+ V+K ++SK++ S +I + H G+A +GL D R +V RA+ E Y E I V+ LA+++ ++ T Y +RP+G +++ G +L+ +PSG Y IG GR AA E+ +++ + ++ K ++ E K +EM + + S Q +K+ Sbjct: 22 LYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKALHSA-TEGKFDVDTVEMG-IVESSTAQFKKM 226
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 57/183 (31.15%), Postives = 96/183 (52.46%), Query Frame = -3 Query: 254 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDE 802 ++Q+EYA +AV IG++ +G+V+ +K S +M P S +IH H G+A AG AD RQ++ A+ ++ YGEPI ++ L + V ++ T RPFG +++GG + P+LY +PSG Y + +IG R + +E+ ++T +G+ + I DE Sbjct: 23 LYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELALEAIASTSDE 205
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 63/198 (31.82%), Postives = 108/198 (54.55%), Query Frame = -3 Query: 215 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 802 ++Q+EYA +A+ N+G+ +G+ DG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ A Y Y EPIPV++L Q + T + LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ +++ +T + V K++ D A +LE++ V Sbjct: 18 LYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 63/198 (31.82%), Postives = 108/198 (54.55%), Query Frame = -3 Query: 215 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 802 ++Q+EYA +A+ N+G+ +G+ DG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ A Y Y EPIPV++L Q + T + LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ +++ +T + V K++ D A +LE++ V Sbjct: 18 LYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 57/162 (35.19%), Postives = 96/162 (59.26%), Query Frame = -3 Query: 311 QIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEM 796 QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I S+ + G+ +G+ D R +V +++ +A Y +Y E IPV +L + A+ + T +RPFG +++ GYD +GPQLY ++PSG + + +A+GK AKT +EK +M Sbjct: 21 QIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 182
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.180e-23 Identity = 57/162 (35.19%), Postives = 96/162 (59.26%), Query Frame = -3 Query: 311 QIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEM 796 QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I S+ + G+ +G+ D R +V +++ +A Y +Y E IPV +L + A+ + T +RPFG +++ GYD +GPQLY ++PSG + + +A+GK AKT +EK +M Sbjct: 21 QIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 182
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA2_DROME (Proteasome subunit alpha type-2 OS=Drosophila melanogaster GN=Pros25 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23 Identity = 66/201 (32.84%), Postives = 101/201 (50.25%), Query Frame = -3 Query: 194 QIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQ 796 Q+EYA AV +GI +G+V+ E S + S R+ ++ H GM +G+ D R +V +A+ A Y Y EPIPV +L QRVA+ + T +RPFG +++ G+D D P LY +PSG + + A+GK KT +EK + SE + A + E K A +E+ +CD++ Q Sbjct: 21 QLEYALAAVSGGAPSVGIIASNGVVIATENKHKSPLYEQHSVHRVEMIYNHIGMVYSGMGPDYRLLVKQARKIAQTYYLTYKEPIPVSQLVQRVATLMQEYTQSGGVRPFGVSLLICGWDNDRPYLYQSDPSGAYFAWKATAMGKNAVNGKTFLEK-RYSEDLELDDAVHTAILTLKEGFEGKMTADNIEIG-ICDQNGFQ 219
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSA2_DICDI (Proteasome subunit alpha type-2 OS=Dictyostelium discoideum GN=psmA2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.424e-23 Identity = 63/192 (32.81%), Postives = 108/192 (56.25%), Query Frame = -3 Query: 221 QIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMS 796 QIE+A +A + G+ IGIK K+G+V+ EK + S + + S ++I + + G+ AG+ D R ++ +A+ E+ Y Y E IPV +L + +AS + T +RPFG +++ G+D GP LY ++PSG + + AIGK ++KT +EK + S+ + I+ A I E + F +E++ Sbjct: 20 QIEHALQAAASGGSAIGIKAKNGVVLITEKKLHSLVDVT-SVQKISMITENIGLVYAGMGPDSRVLIKKARKESEKYYKQYKEKIPVLQLVRELASIMQEFTQSGGVRPFGVSLLVAGFDEKGPHLYQVDPSGSYFAWKATAIGKNMVSSKTFLEK-RYSDDLEIEDAIQTALITIKEGFETQLTEFNMELA 209
BLAST of CX077957 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.083e-23 Identity = 56/177 (31.64%), Postives = 96/177 (54.24%), Query Frame = -3 Query: 272 VFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKII 802 ++Q++YA +AV T IGIK K +V+ EK A ++ S ++ + H G + AGLA+DGR ++ A++ A + +Y EP+ + L + VA + T + +RPFG +++ G D+ P+L+M EPSG Y AIG+G A +EK ++ + ++ K + Sbjct: 23 LYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKAL 199 The following BLAST results are available for this feature:
BLAST of CX077957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077957 ID=CX077957; Name=CX077957; organism=Citrus sinensis; type=EST; length=804bpback to top |