CX077956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 1.054e-59 Identity = 119/231 (51.52%), Postives = 154/231 (66.67%), Query Frame = 3 Query: 39 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKL---KLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV-CDESNRQHQKV 719 M+SIGTGYDLS + FSPDGR FQ+EYA KAV+N T IGIKC DG+V VEKLI SK+++P N +I V RH G +GL DGR +V R + EA +++ +Y PIP+ A R+ YV TLY +RPFG I GG D++G LYM+EPSG + Y GAA GKGRQ+AK E+EKL ++ R+ V + AKIIY H++ K+K FELE+SW E+N H+ V Sbjct: 1 MTSIGTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFV 231
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 1.376e-59 Identity = 120/217 (55.30%), Postives = 151/217 (69.59%), Query Frame = 3 Query: 39 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 686 MS+IGTGYDLS + FSPDGRVFQI+YA+KAV+ SGTVIGI+ KD +V+ VEK+I SK+ P + RI ++ ++ GMAVAGL ADG + A+ EA NY + + IP+K L RVA YVH TLY +RPFG +IL +D +GPQLY IEPSG S+ YF A GK +Q AKTE+EKLK+ +M + V +IIY VHDE KDK F EM V Sbjct: 1 MSTIGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKM-DMRTDELVESAGEIIYKVHDELKDKDFRFEMGLV 216
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 213.386 bits (542), Expect = 1.333e-54 Identity = 110/229 (48.03%), Postives = 159/229 (69.43%), Query Frame = 3 Query: 39 MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 722 MSSIGTGYDL+ +TFSPDGR+FQ+EYA KAVDN+GT+I I+ K+G+V+ +KLI+SK+ +N R+ +V+ + G+AVAG DG + A EA + Y EP+P++ +A VA Y+H+ TL RPFG G +++ G +L+++EPSG++Y Y A+GK RQAAK EIEKLK+ E+ Q V E A+II V DE KDK ++EM WV +++N ++++VP Sbjct: 1 MSSIGTGYDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHTL-GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEAARIIMVVRDENKDKNVQIEMGWVGEQTNGKYEEVP 228
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.254e-36 Identity = 74/205 (36.10%), Postives = 119/205 (58.05%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFEL 671 GYD ++T FSPDGR+FQ++YA +AV T +G+KCKDG+V+ VEK + SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ + T Y +RPFG +++ G + + P+L+ +PSG + + AIG GR A E+ EMT + + + + +E ++ E+ Sbjct: 9 GYDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVN-EKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDEMTLEEAIKLAVLALSKIMEEPSPESIEV 212
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.254e-36 Identity = 81/221 (36.65%), Postives = 128/221 (57.92%), Query Frame = 3 Query: 54 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQK 716 T YD ++T FSPDGR+FQ+EYA +AV T +GIK ++G+V+GV+K + SK++ P S +++ + H G A AGL AD R +V RA+ EA Y YGEPI V L + + + T + +RPFG +++ G D G +L+ +PSG + AIG+GRQ A E+ +MT ++ + + +Y E + A LE++ V + R+ ++ Sbjct: 8 TAYDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYREDMTLQEAIELAVRALYEASRE-ETTADNLEIAVVDKQGFRKLER 227
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.061e-35 Identity = 82/222 (36.94%), Postives = 128/222 (57.66%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRQHQKVP 722 GYD ++T FSPDGR+FQ+EYA +AV T +G+K K+GIV+ V+K SK++ P S +I + H G A +GL AD R I+ +A+ EA Y EPI V+ LA+++ + T + +RPFG +I+GG + G +L+ +PSG Y AIG GR AA E EK +M Q + +Y E K +E++ V + ++++++++P Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDDMNLNQAIELALDAVYEA-TEGKTTPESVEIA-VIEAADKKYRRLP 227
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.173e-34 Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 608 GYD ++T FSPDGR+FQ+ YA +AV T +G+KCKDG+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA + YGEP P+ + +++ + T Y +RPFG +++ G + D P+LY +PSG + + AIG GR A E +MT + + Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVN-DKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAI 191
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.414e-34 Identity = 70/184 (38.04%), Postives = 106/184 (57.61%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV 608 GYD ++T FSPDGR+FQ+ YA +AV T +G+KC +G+V+ VEK I S+++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP PV + +++ + T Y +RPFG +++ G + D P+LY +PSG + + AIG GR A E+ +M + Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGIN-DRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDDMNLEDAI 191
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 7.605e-34 Identity = 72/172 (41.86%), Postives = 104/172 (60.47%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 GYD ++T FSPDGR+FQ+EYA +AV T IGIKCK+G+++ +K + SK++ + +I+ + H A +GL AD R ++ RA+ EA Y EPI VKELA+++ + T Y +RPFG +++ G D + P+LY +PSG Y AIG GR A EK Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVD-EVPKLYETDPSGALLEYKATAIGMGRNAVTEFFEK 177
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 9.933e-34 Identity = 74/188 (39.36%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVA 620 GYD ++T FSPDGR+FQ+ YA +AV T +G+K K+G+V+ VEK I SK++ P S +I + H A +G+ AD R +V RA+ EA Y YGEP+P+ L +++ T Y +RPFG +++ G + D P+LY +PSG + + AIG GR A E S+ +G I++A Sbjct: 9 GYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVN-DKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFED-HYSDDLDMEGAIKLA 194 The following BLAST results are available for this feature:
BLAST of CX077956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077956 ID=CX077956; Name=CX077956; organism=Citrus sinensis; type=EST; length=860bpback to top |