CX077956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 5.640e-29 Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 GY S+TTFSP G++ QIEYA AV +GIK +G+V+ EK S + S +I + +H GM +G+ D R +V RA+ A Y VY EPIP +L QRVAS + T +RPFG +++ G+D D P L+ +PSG + + A+GK KT +EK Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEK 176
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.640e-29 Identity = 69/205 (33.66%), Postives = 114/205 (55.61%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV-IEVAKIIYGVHDEAKDKAFEL 671 Y S+TTFSP G++ QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I + + G+ +G+ D R +V +++ +A Y +Y EPIPV +L + A+ + T +RPFG +++ GYD GPQLY ++PSG + + +A+GK AKT +EK +M + + + G E K E+ Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.366e-29 Identity = 72/211 (34.12%), Postives = 120/211 (56.87%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 686 YD T FSP+GR++Q+EYA +A+ N+G+ IGI KDG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ +A Y +Y EP+PV++L Q + T + LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ +++ + T + V K++ D + +LE++ V Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEV 215
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.366e-29 Identity = 67/172 (38.95%), Postives = 101/172 (58.72%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEA-TNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 Y S+TTFSP+G++ QIEYA AV+ T +GIK DG+V+ EK S++ + S ++ ++ GM +G+ D R +V +++ A T Y+ +Y E P K L Q +AS + T +RPFG +++ G D GP LY ++PSG + + AIGK AAKT +EK Sbjct: 5 YAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEK 176
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.621e-29 Identity = 69/197 (35.03%), Postives = 108/197 (54.82%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEA 650 YD +T FSPDGR++Q+EYA +AV IGI+ +DG+V+ V+K I S +M S +IH H G+A AG AD RQ++ A+ +A + Y EPI V+ L + V ++ T RPFG +I+GG + P+LY +PSG Y + A+G R + +E+ + G+ + + V+D++ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQYTQVGGARPFGVALIIGGIEDGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDDS 206
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.621e-29 Identity = 69/205 (33.66%), Postives = 113/205 (55.12%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGV-IEVAKIIYGVHDEAKDKAFEL 671 Y S+TTFSP G++ QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I + + G +G+ D R +V +++ +A Y +Y EPIPV +L + A+ + T +RPFG +++ GYD GPQLY ++PSG + + +A+GK AKT +EK +M + + + G E K E+ Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEI 210
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.257e-28 Identity = 72/211 (34.12%), Postives = 117/211 (55.45%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 686 YD T FSP+GR++Q+EYA +A+ N+G+ +G+ DG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ A Y Y EPIPV++L Q + T + LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ +++ MT + V K++ D A +LE++ V Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.257e-28 Identity = 72/211 (34.12%), Postives = 117/211 (55.45%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPG-SNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDR-DGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 686 YD T FSP+GR++Q+EYA +A+ N+G+ +G+ DG+V+ EK + SK++ S +++ + H AVAG+ +D ++ A+ A Y Y EPIPV++L Q + T + LRPFG + G+D+ G QLYM +PSG + AA+G QAA++ +++ MT + V K++ D A +LE++ V Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.257e-28 Identity = 65/177 (36.72%), Postives = 107/177 (60.45%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEM 590 Y S+TTFSP G++ QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I S+ + G+ +G+ D R +V +++ +A Y +Y E IPV +L + A+ + T +RPFG +++ GYD +GPQLY ++PSG + + +A+GK AKT +EK +M Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 182
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 1.257e-28 Identity = 65/177 (36.72%), Postives = 107/177 (60.45%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEM 590 Y S+TTFSP G++ QIE+A AV + T +GIK +G+V+ EK + S ++ S ++I S+ + G+ +G+ D R +V +++ +A Y +Y E IPV +L + A+ + T +RPFG +++ GYD +GPQLY ++PSG + + +A+GK AKT +EK +M Sbjct: 6 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKAANGVVIATEKKLPSILVDETSVQKIQSLTPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDM 182 The following BLAST results are available for this feature:
BLAST of CX077956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077956 ID=CX077956; Name=CX077956; organism=Citrus sinensis; type=EST; length=860bpback to top |