CX077956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27 Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 3 Query: 57 GYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 GY S+TTFSP G++ QIEYA AV +GIK +G+V+ EK S + S ++ + +H G+ +G+ D R +V RA+ A Y VY EPIP +L QRVAS + T +RPFG +++ G++ P L+ +PSG + + A+GK KT +EK Sbjct: 5 GYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEK 176
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.895e-27 Identity = 61/199 (30.65%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKD 656 YD +T FSPDGR++Q+EYA +AV +G++ +DG+V+ ++ S ++ S +IH + H G+A AG AD RQ++ A+ ++ Y EP V+ L + + Y+ T RPFG +++ G + P+L+ +PSG Y + AIG R+ +T +E+ M G+ + + V+++ D Sbjct: 9 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGVRTEDGVVIAADRHARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQYTQTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALASVNEDGLD 207
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 9.005e-27 Identity = 60/171 (35.09%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDGR+FQ+EYA +AV T +G+K +G+++ +K I SK++ S +I + + +GL AD R ++ A+ A + YG + ++ L +RVA + T Y +RP+G +I G D+ GP+L+ +P+G Y AIG G+ A + +EK Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEK 178
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.005e-27 Identity = 63/172 (36.63%), Postives = 101/172 (58.72%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDG +FQ+EYA +AV T +GI+ KD +V+GVEK +K+ + R+I ++ H MA AGL AD R ++ RA+ E ++ +P+ V+ + + +A+ T RPFG ++ G+D DG P+LY +PSG + + AIG+ + + +EK Sbjct: 5 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEK 176
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.176e-26 Identity = 63/172 (36.63%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDG +FQ+EYA +AV T +G++ KD +V+GVEK +K+ + R+I ++ + MA AGL AD R ++ RA+ E ++ +P+ V+ + + +AS T RPFG ++ G+D DG P+LY +PSG + + AIG+G ++ + +EK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.176e-26 Identity = 63/172 (36.63%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDG +FQ+EYA +AV T +G++ KD +V+GVEK +K+ + R+I ++ + MA AGL AD R ++ RA+ E ++ +P+ V+ + + +AS T RPFG ++ G+D DG P+LY +PSG + + AIG+G ++ + +EK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26 Identity = 69/214 (32.24%), Postives = 114/214 (53.27%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYV-----HLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGVHDEAKDKAFELEMSWV 686 YD V TFSP+GR+FQ+EYA + T IGI+ +G+ + VEK I S +M P S +I + H G A++GL AD + ++ +A+ E N+ Y E + V+ + Q V++ RPFG ++ GG D GPQL+ ++PSG + AIG + A++ ++++ T ++ + I+ V +E K A +E++ V Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSTTLKEAIKSSLIILKQVMEE-KLNATNIELATV 220
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26 Identity = 65/196 (33.16%), Postives = 104/196 (53.06%), Query Frame = 3 Query: 54 TGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEMTCRQGVIEVAKIIYGV 638 T YD + T FSP+G ++Q+ YA +AV T +GIK +G+V+ EK ++ +I+ + H G+A AG+ DGR ++ A+ + +YGEP PV+ +A+ VA T + +RPFG +I G + DG ++Y +P G + + AIG G Q A EK S+M+ + KI+Y + Sbjct: 10 TAYDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAI 205
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26 Identity = 62/172 (36.05%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDG +FQ+EYA +AV T +G++ K+ +V+GVEK +K+ + R+I ++ + MA AGL AD R ++ RA+ E ++ +P+ V+ + + +AS T RPFG ++ G+D DG P+LY +PSG + + AIG+G ++ + +EK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174
BLAST of CX077956 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26 Identity = 62/172 (36.05%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 60 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVIGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVTRAKSEATNYESVYGEPIPVKELAQRVASYVHLCTLYWWLRPFGCGVILGGYDRDG-PQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEK 572 YD ++T FSPDG +FQ+EYA +AV T +G++ K+ +V+GVEK +K+ + R+I ++ + MA AGL AD R ++ RA+ E ++ +P+ V+ + + +AS T RPFG ++ G+D DG P+LY +PSG + + AIG+G ++ + +EK Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEK 174 The following BLAST results are available for this feature:
BLAST of CX077956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077956 ID=CX077956; Name=CX077956; organism=Citrus sinensis; type=EST; length=860bpback to top |