CX077949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB2_SOYBN (Tubulin beta-2 chain OS=Glycine max GN=TUBB2 PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.286e-52 Identity = 101/239 (42.26%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + I GQ G Q+G WE+ C EHGI P G+ D + + N +++E G+ V RAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D +++LDNEA+YDIC R+L + P++ +LN L+S +S +T Sbjct: 1 MRESLHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYGGDSELQL--ERINVYYNEASCGRFVRRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADESMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.286e-52 Identity = 104/239 (43.51%), Postives = 146/239 (61.09%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + + GQ G Q+G+ WE+ EHGIQPDG + + + + +++E GK+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD LD IRK A+ C LQGF + +++ +Y + F+V PSP+VS +VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN LVS +S +T Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.597e-52 Identity = 96/239 (40.17%), Postives = 149/239 (62.34%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + + GQ G Q+G+ WE+ C EHG+ P G+ D + + + +++E G++VPRAV +DLEP +D +R+G Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + + F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYNGDGSSDIQLERIDVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 239
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB3_WHEAT (Tubulin beta-3 chain OS=Triticum aestivum GN=TUBB3 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.597e-52 Identity = 101/239 (42.26%), Postives = 147/239 (61.51%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQL--ERINVYYNEASGGRFVPRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB1_PEA (Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.597e-52 Identity = 99/239 (41.42%), Postives = 147/239 (61.51%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MR+ + I GQ G Q+G WE+ C EHGI P G+ D + + + +++E G+ VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R L + P++ +LN L+S +S +T Sbjct: 1 MRQILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERIDVYYNEASGGRFVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB1_LUPAL (Tubulin beta-1 chain OS=Lupinus albus GN=TUBB1 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.597e-52 Identity = 101/239 (42.26%), Postives = 147/239 (61.51%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDNELQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.310e-52 Identity = 99/242 (40.91%), Postives = 152/242 (62.81%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + + GQ G Q+G+ WE+ C EHGI G+ S+ GG D + N +++E G++VPRAV +DLEP ++ +R+G + ++F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGIDQTGKYISE---GGSDTQLERINVYYNEASGGRYVPRAVLMDLEPGTMESIRSGPFGKIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVT 239
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB5_GOSHI (Tubulin beta-5 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 7.310e-52 Identity = 100/239 (41.84%), Postives = 148/239 (61.92%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + I GQ G Q+G WE+ C EHG+ G+ D + + N +++E G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGDSDLQL--ERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB7_MAIZE (Tubulin beta-7 chain OS=Zea mays GN=TUBB7 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.547e-52 Identity = 101/239 (42.26%), Postives = 147/239 (61.51%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF V +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQL--ERINVYYNEASGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBB7_GOSHI (Tubulin beta-7 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.547e-52 Identity = 101/239 (42.26%), Postives = 146/239 (61.09%), Query Frame = 3 Query: 87 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLT 803 MRE + + GQ G Q+G WE+ EHGI P G V + N +++E G++VPRAV +DLEP +D +RTG + QLF P+ I G+ A NN+A+GHYT G E++D LD +RK A+NC LQGF + +++ +Y + L F+V+PSP+VS +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LNRL+S +S T Sbjct: 1 MREILHVQAGQCGNQIGGKFWEVVSDEHGIDPKGNYVGTSRVQL--ERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRTGPHGQLFRPDNFIFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCACLQGFQICHSLGGGTGSGMGTLLISKIKEEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENGDECMVLDNEALYDICFRTLKLTNPSFGDLNRLISTTMSGAT 237 The following BLAST results are available for this feature:
BLAST of CX077949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077949 ID=CX077949; Name=CX077949; organism=Citrus sinensis; type=EST; length=807bpback to top |