CX077949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBD_MACFA (Tubulin delta chain OS=Macaca fascicularis GN=TUBD1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.632e-14 Identity = 52/237 (21.94%), Postives = 106/237 (44.73%), Query Frame = 3 Query: 99 ISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTY---RQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 800 +++ +GQ G Q+G ++ L G + FFSE G + RAV VD+EP VI++ + R + K+ + NN+A G+ G + +D IRK + C GF + ++ Y K+ ++P +V+ YNS+L+ L +D ++ +N+A++ IC + ++I++ +++++N++++ + S+ Sbjct: 4 VTVQLGQCGNQIGFEVFDAL-LSDSHSSQGLCCKRENEAYQASCKERFFSEEENGVPIARAVLVDMEPKVINQTLSKAAQSGRWKYGQHACFCQKQGSGNNWAYGYSVHGPRHEESIMDLIRKEVEKCDSFSGFFIIMSMAGGTGSGIGAFVTQNLQDQYSNSLKMNQIIWPYG-TGEVIVQNYNSILTLSHLYRSSDALLVHENDAVHKICAKLMNIKQISFSDINQVLAHQLGSV 238
BLAST of CX077949 vs. ExPASy Swiss-Prot
Match: TBD_MOUSE (Tubulin delta chain OS=Mus musculus GN=Tubd1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.542e-12 Identity = 54/240 (22.50%), Postives = 109/240 (45.42%), Query Frame = 3 Query: 99 ISIHIGQAGIQVGNACWE-LYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEV-----RTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSL 800 +++ +GQ G Q+G ++ L+ H Q G FF E G V RAV VD+EP VI++ ++G + H K+ + NN+A G+ G + + ++ I+ + C L GF + ++ Y K+ ++P +V+ YNS+L+ L +D ++ +N+A++ IC + ++I++ ++ +LN++++ + S+ Sbjct: 4 VTVQLGQCGNQIGFEVFDALFRDSHCSQ--GLCSKRDNEAYQASCRERFFREEENGVPVARAVLVDMEPKVINQTLSKAAQSGRWNYGQHTS--FCQKQGSGNNWAYGYSVHGPKHEESIMNLIQTEVEKCDSLSGFFIIMSMAGGTGSGLGAFVTQKLQDQYSSSLKMNQIIWPYG-TGEVIVQNYNSILTLSHLYRSSDALLIHENDAVHKICAKRMNIKQISFRDLNQVLAHQLGSV 238 The following BLAST results are available for this feature:
BLAST of CX077949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 422
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077949 ID=CX077949; Name=CX077949; organism=Citrus sinensis; type=EST; length=807bpback to top |