CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.775e-28
Identity = 66/203 (32.51%), Postives = 109/203 (53.69%), Query Frame = 2
Query:  185 RFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +F  + +  AT  F + N +G+G FGEVYKG+   G+ VA+K   K  G   +EF +EV  +A +QHRNLV LLG+C E + + L+YE++PN S+   ++  +  S      ++++ I                 ++H+D K  N+L+ +D  AK+AD G+    G       + ++     +++ E   + +FS KSDVYSF
Sbjct:  338 QFDFKAIEAATNKFCETNKLGQGGFGEVYKGIFPSGVQVAVKRLSKTSGQGEREFANEVIVVAKLQHRNLVRLLGFCLERDERILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKI-IGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSF 539          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.236e-28
Identity = 80/221 (36.20%), Postives = 120/221 (54.30%), Query Frame = 2
Query:  140 PGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYG---PSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            P RN+ + L+I         ++  AT NF ++ LIG+G FG VYK +L DG   AIK+      Q   EF  E++ L+ I+HR+LV+L GYC+EN+   L+YE++  G++  HLYG   PS   +Q+LE    + I                 ++H+D K+ N+L+DE  IAKVAD GL   +   D +  S  +     +L  E  +  + +EKSDVY+F
Sbjct:  466 PLRNLHLGLTI------PFTDILSATNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKRGKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSNLPSLTWKQRLE----ICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVADFGLSK-IHNQDESNISINIKGTFGYLDPEYLQTHKLTEKSDVYAF 675          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.236e-28
Identity = 76/211 (36.02%), Postives = 112/211 (53.08%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP---TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E ++  +R F   EL  AT NF+   ++G+G  G VYKG+L DG +VA+K+         +EFI+EV  LA I HRN+V LLG C E  +  L+YE++PNG +   L+  S       E +  ++I               P + H+D KT N+L+DE   AKV+D G    +   D    ++QV     ++  E  +  +F+EKSDVYSF
Sbjct:  395 EGNVEMSRIFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKRSKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSYLHSAASFP-IYHRDIKTTNILLDERNRAKVSDFGTSRSV-TIDQTHLTTQVAGTFGYVDPEYFQSSKFTEKSDVYSF 603          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 6.236e-28
Identity = 73/213 (34.27%), Postives = 118/213 (55.40%), Query Frame = 2
Query:  158 IELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            I L+  E+ +F ++ +  AT NFS+ N +G G FGEVYKG+L +G  +A+K   K  G    EF +EV  +A +QH NLV LLG+  +   + L+YE++PN S+   L+ P++  R +L++  R +I                 +++H+D K +N+L+D D   K+AD G+    G       +++V     +++ E     +FS KSDVYSF
Sbjct:  337 IVLNEAESVQFDLKTIEAATGNFSEHNKLGAGGFGEVYKGMLLNGTEIAVKRLSKTSGQGEIEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVPNKSLDYFLFDPNK--RNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSF 547          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 6.401e-28
Identity = 75/245 (30.61%), Postives = 122/245 (49.80%), Query Frame = 2
Query:   59 FLSWFCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F+ +  +Y  R   + +  GS+E S   G+ +          RF +  + +AT +FS +N +G+G FG VYKG   +G  VA+K   K  G    EF +EV  L  +QH+NLV LLG+C E + + L+YE++PN S+   ++   + S    E + R+ I                +++H+D K +N+L+D +   KVAD G        +    + ++     ++A E     + S KSDVYSF
Sbjct:  304 FIGFIKVYARRG--KLNNVGSAEYSDSDGQFM---------LRFDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKGSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRI-IEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVADFGTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSF 536          

HSP 2 Score: 21.557 bits (44), Expect = 6.401e-28
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  783 FGVFLLELVSG 815
            FGV LLE++SG
Sbjct:  536 FGVMLLEMISG 546          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.329e-28
Identity = 71/207 (34.30%), Postives = 107/207 (51.69%), Query Frame = 2
Query:  176 EARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E  +FQ   +  AT  FS+ N +G G FGEVYKG L  G  VAIK+     TQ   EF +EV  +A +QHRNL  LLGYC +   + L+YE++PN S+   L+      R+ L+++ R  I                  ++H+D K +N+L+D D   K++D G+    G       + ++     +++ E     ++S KSDVYSF
Sbjct:  331 ETLQFQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQGSTQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLF--DNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSF 535          

HSP 2 Score: 21.1718 bits (43), Expect = 8.329e-28
Identity = 7/13 (53.85%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            FGV +LEL++G++
Sbjct:  535 FGVLVLELITGKK 547          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.064e-27
Identity = 75/205 (36.59%), Postives = 112/205 (54.63%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLR--NFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F + ++  AT NF     IGEG FG VYKG L +G L+A+K+      Q   EF++E+  ++++QH NLV L G C E N   L+YEY+ N  +S  L+G  + SR KL++  R  I                 ++VH+D K +NVL+D+D  AK++D GL   N  G T +   S+++     ++A E       +EK+DVYSF
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHI---STRIAGTIGYMAPEYAMRGYLTEKADVYSF 867          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.064e-27
Identity = 70/207 (33.82%), Postives = 115/207 (55.56%), Query Frame = 2
Query:  176 EARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E+ +F ++ +  AT NFS++N +G+G FGEVYKG+L +G  +A+K   K  G    EF +EV  +A +QH NLV LLG+  +   + L+YE++ N S+   L+ P++  R +L++  R +I                 +++H+D K +N+L+D D   K+AD G+    G       + +V     +++ E     +FS KSDVYSF
Sbjct:  323 ESVQFDLKTIESATSNFSERNKLGKGGFGEVYKGMLMNGTEIAVKRLSKTSGQGEVEFKNEVVVVAKLQHINLVRLLGFSLQGEEKLLVYEFVSNKSLDYFLFDPTK--RNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVDQTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSF 527          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLJ_ARATH (Wall-associated receptor kinase-like 10 OS=Arabidopsis thaliana GN=WAKL10 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.389e-27
Identity = 76/212 (35.85%), Postives = 117/212 (55.19%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPS-QVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E ++   R F   EL  AT+NFS   ++GEG  G VYKG+L DG +VA+KK         +EFI+EV  L+ I HRN+V LLG C E ++  L+YE+IPNG++  HL+  S   +    E + R+++               P + H+D K+ N+++DE   AKV+D G    +   D    ++ V+    ++  E  +  +F++KSDVYSF
Sbjct:  412 EGNVDSTRVFNSRELEKATENFSLTRILGEGGQGTVYKGMLVDGRIVAVKKSKVVDEDKLEEFINEVVILSQINHRNIVKLLGCCLETDVPILVYEFIPNGNLFEHLHDDSDDYTMTTWEVRLRIAVDIAGALSYLHSAASSP-IYHRDIKSTNIMLDEKHRAKVSDFGTSRTV-TVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSF 621          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.814e-27
Identity = 77/211 (36.49%), Postives = 114/211 (54.03%), Query Frame = 2
Query:  179 ARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG------RTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +R F  EEL  AT NFS K ++G+G  G VYKG++ DG ++A+K+         ++FI+E+  L+ I HRN+V L+G C E  +  L+YEYIPNG +   L+  S       E + R++I               P + H+D KT N+L+DE + AKV+D G    +        T VAG    +   E FL+S+      +++KSDVYSF
Sbjct:  417 SRLFSSEELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLEKFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIPNGDMFKRLHDESDDYAMTWEVRLRIAIEIAGALTYMHSAASFP-IYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMD-PEYFLSSQ------YTDKSDVYSF 619          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
CRK4_ARATH4.775e-2832.51Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y2232_ARATH6.236e-2836.20Probable receptor-like protein kinase At2g23200 OS... [more]
WAKLB_ARATH6.236e-2836.02Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
CRK17_ARATH6.236e-2834.27Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK40_ARATH6.401e-2830.61Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
CRK25_ARATH8.329e-2834.30Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
Y1765_ARATH1.064e-2736.59Probable LRR receptor-like serine/threonine-protei... [more]
CRK18_ARATH1.064e-2733.82Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
WAKLJ_ARATH1.389e-2735.85Wall-associated receptor kinase-like 10 OS=Arabido... [more]
WAKLE_ARATH1.814e-2736.49Wall-associated receptor kinase-like 5 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
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