CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.370e-27
Identity = 78/234 (33.33%), Postives = 126/234 (53.85%), Query Frame = 2
Query:   98 SRTSETGSSEPSVQPGRNVGIELS-IREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK---RPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGP-SQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            SR + + S   S     N G E+S +   R + + EL  AT    ++N+IGEG +G VY+G+L DG  VA+K      G   +EF  EV  +  ++H+NLV LLGYC E   + L+Y+++ NG++   ++G    VS    + +  + I               P+VVH+D K++N+L+D  + AKV+D GL   LG ++ +  +++V     ++A E       +EKSD+YSF
Sbjct:  111 SRGTASASETASYSGSGNCGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNI-ILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLG-SESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSF 342          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLI_ARATH (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana GN=WAKL22 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 2.370e-27
Identity = 73/209 (34.93%), Postives = 114/209 (54.55%), Query Frame = 2
Query:  167 SIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAP---TQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +++ ++ F  +EL  AT NF+   ++G+G  G VYKG+L DG +VA+K+         +EFI+EV  L+ I HRN+V L+G C E  +  L+YE+IPNG +   L+  S       + + R+S+               P V H+D KT N+L+DE + AKV+D G    +   D    ++ V     +L  E  +  +F++KSDVYSF
Sbjct:  402 NVQSSKIFSSKELEKATDNFNMNRVLGQGGQGTVYKGMLVDGRIVAVKRSKVLDEDKVEEFINEVGVLSQINHRNIVKLMGCCLETEVPILVYEHIPNGDLFKRLHHDSDDYTMTWDVRLRISVEIAGALAYLHSAASTP-VYHRDVKTTNILLDEKYRAKVSDFGTSRSI-NVDQTHLTTLVAGTFGYLDPEYFQTSQFTDKSDVYSF 608          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.370e-27
Identity = 76/242 (31.40%), Postives = 124/242 (51.24%), Query Frame = 2
Query:   71 FCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            +C    R+  +T +T S+         VG +++  ++ +     +  AT +F++ N IG G FGEVYKG   +G  VA+K+      Q   EF  EV  +A +QHRNLV LLG+  +   + L+YEY+PN S+   L+ P++  + +L++  R +I                  ++H+D K +N+L+D D   K+AD G+    G       +S++     ++A E     +FS KSDVYSF
Sbjct:  310 YCFLAQRT-KKTFDTASAS-------EVGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTK--QTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSF 541          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.095e-27
Identity = 74/206 (35.92%), Postives = 111/206 (53.88%), Query Frame = 2
Query:  182 RRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGML-VAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            R F   E+  ATKNF +  ++G G FG+VY+G +  G   VAIK+      Q   EF  E+  L+ ++HR+LV+L+GYC+EN    L+Y+Y+ +G++  HLY   +     L +K RL I                  ++H+D KT N+L+DE ++AKV+D GL       D    S+ V     +L  E    ++ +EKSDVYSF
Sbjct:  522 RHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKRGNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLY---KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSF 724          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 5.234e-27
Identity = 76/241 (31.54%), Postives = 121/241 (50.21%), Query Frame = 2
Query:   83 RNRSVSRTSETGSSE---PSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKR---PGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXX-PRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            R + +     +GSS     SV    ++ +    +  R+     L  AT  FS  ++IG G FG+VYK  L DG +VAIKK     G   +EF+ E+  +  I+HRNLV LLGYC+    + L+YEY+  GS+   L+  ++     L++  R  I                P ++H+D K++NVL+D+DF+A+V+D G+   +   D     S +     ++  E  +  R + K DVYS+
Sbjct:  808 REKYIESLPTSGSSSWKLSSVHEPLSINVATFEKPLRKLTFAHLLEATNGFSADSMIGSGGFGDVYKAKLADGSVVAIKKLIQVTGQGDREFMAEMETIGKIKHRNLVPLLGYCKIGEERLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSY 1048          

HSP 2 Score: 21.557 bits (44), Expect = 5.234e-27
Identity = 8/13 (61.54%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            +GV LLEL+SG++
Sbjct: 1048 YGVILLELLSGKK 1060          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 75/208 (36.06%), Postives = 111/208 (53.37%), Query Frame = 2
Query:  182 RRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQ---KLEFKHRLSIXXXXXXXXXXXXXXXPR-VVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            R F   EL  AT+NF +  + G G FG+VY G +  G  VAIK+   +  Q   EF  E++ L+ ++HR+LV+L+G+C EN    L+YEY+ NG +  HLYG  +        L +K RL I                + ++H+D KT N+L+DE+ +AKV+D GL       D    S+ V     +L  E    ++ ++KSDVYSF
Sbjct:  511 RYFPFTELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKD-APMDEGHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSF 717          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.279e-27
Identity = 70/215 (32.56%), Postives = 112/215 (52.09%), Query Frame = 2
Query:  149 NVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK---RPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            N   E    ++  F  E + +AT +FS  N IGEG FG VYKG L DG+ +A+K+     G    EF  EV  +  +QH+NLV L G+  + + + L+YE+IPN S+   L+ P +  +   E ++ + +               P ++H+D K++NVL+DE  + K++D G+       +    + +V     ++A E     RFS K+DVYSF
Sbjct:  308 NAENEFESTDSLHFDFETIRVATDDFSLTNKIGEGGFGVVYKGHLPDGLEIAVKRLSIHSGQGNAEFKTEVLLMTKLQHKNLVKLFGFSIKESERLLVYEFIPNTSLDRFLFDPIKQKQLDWEKRYNIIVGVSRGLLYLHEGSEFP-IIHRDLKSSNVLLDEQMLPKISDFGMARQFDFDNTQAVTRRVVGTYGYMAPEYAMHGRFSVKTDVYSF 521          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 6.875e-27
Identity = 73/207 (35.27%), Postives = 108/207 (52.17%), Query Frame = 2
Query:  176 EARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIK---KRPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS-IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E+ +     +  AT  FS+ N IG+G FGEVYKG   +G  VA+K   K  G    EF +EV  +A +QHRNLV LLG+      + L+YEY+PN S+   L+ P++  + +L++  R   I                 ++H+D K +N+L+D D   K+AD GL    G       +S++     ++A E     +FS KSDVYSF
Sbjct:  321 ESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAK--QNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSF 525          

HSP 2 Score: 21.557 bits (44), Expect = 6.875e-27
Identity = 7/13 (53.85%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            FGV +LE++SG++
Sbjct:  525 FGVLVLEIISGKK 537          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.895e-27
Identity = 77/206 (37.38%), Postives = 114/206 (55.34%), Query Frame = 2
Query:  176 EARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK-RPGAPTQ--EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            + + F  E +  AT  +++  ++G+G  G VYKG+LQD  +VAIKK R G  +Q  +FI+EV  L+ I HRN+V LLG C E  +  L+YE+I +G++  HL+G    S    E + R++I               P ++H+D KTAN+L+DE+  AKVAD G    +   D    ++ V     +L  E       +EKSDVYSF
Sbjct:  392 DVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIP-IIHRDVKTANILLDENLTAKVADFGASRLI-PMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSF 595          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 6.895e-27
Identity = 79/215 (36.74%), Postives = 117/215 (54.42%), Query Frame = 2
Query:  152 VGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGL-RNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            V +  S ++++RF   E+   TKNF  + ++G+G FG VY G ++    VA+K    + TQ   EF  EV  L  + H NLV+L+GYC E +   L+YE++PNG +  HL G    S      + R+++               P +VH+D KTAN+L+DE+F AK+AD GL R+F G  + +  S+ +     +L  E     R  EKSDVYSF
Sbjct:  542 VDVTFSNKKSKRFTYSEVVQVTKNF--QRVLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPP-MVHRDVKTANILLDENFKAKLADFGLSRSFQGEGE-SQESTTIAGTLGYLDPECYHSGRLGEKSDVYSF 752          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
Y1154_ARATH2.370e-2733.33Probable serine/threonine-protein kinase At1g01540... [more]
WAKLI_ARATH2.370e-2734.93Wall-associated receptor kinase-like 22 OS=Arabido... [more]
CRK8_ARATH2.370e-2731.40Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
FERON_ARATH3.095e-2735.92Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]
BRL3_ARATH5.234e-2731.54Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
Y5613_ARATH5.279e-2736.06Probable receptor-like protein kinase At5g61350 OS... [more]
CRK27_ARATH5.279e-2732.56Cysteine-rich receptor-like protein kinase 27 OS=A... [more]
CRK15_ARATH6.875e-2735.27Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
WAK5_ARATH6.895e-2737.38Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
RLK7_ARATH6.895e-2736.74Receptor-like protein kinase At5g59670 OS=Arabidop... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
back to top