CX077946

Overview
NameCX077946
Unique NameCX077946
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4904 contig Csv1_Contig4904:1..860. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 8.951e-27
Identity = 76/215 (35.35%), Postives = 111/215 (51.63%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPG---APTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHL---YGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E  I   +RF   E+  AT NFS KN++G+G FG VYKG L +G +VA+K+          +F  EV  +    HRNL+ L G+C     + L+Y Y+PNGSV+  L   YG     +  L++  R+SI                P+++H+D K AN+L+DE F A V D GL   L + D +  ++ V      +A E     + SEK+DV+ F
Sbjct:  279 EFEIGHLKRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEVQFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYG----EKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRD-SHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGF 488          

HSP 2 Score: 20.7866 bits (42), Expect = 8.951e-27
Identity = 7/13 (53.85%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            FGV +LEL++G +
Sbjct:  488 FGVLILELITGHK 500          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.005e-27
Identity = 71/215 (33.02%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  152 VGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            VG +++  ++ +     +  AT +F++ N IG G FGEVYKG   +G  VA+K+      Q   EF  EV  +A +QHRNLV LLG+  +   + L+YEY+PN S+   L+ P++  + +L++  R +I                  ++H+D K +N+L+D D   K+AD G+    G       +S++     ++A E     +FS KSDVYSF
Sbjct:  327 VGDDMATADSLQLDYRTIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTK--QIQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSF 539          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.176e-26
Identity = 78/215 (36.28%), Postives = 114/215 (53.02%), Query Frame = 2
Query:  167 SIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLG------RTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            ++  ++ F  +EL  AT NFS   ++G+G  G VYKG+L DG +VA+K+         +EFI+E+  L+ I HRN+V LLG C E  +  L+YEYIPNG +   L+  S       E + R++I               P + H+D KT N+L+DE + AKV+D G    +        T VAG    +   E FL+S+      ++ KSDVYSF
Sbjct:  410 NVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKMEEFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFP-IFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMD-PEYFLSSQ------YTHKSDVYSF 616          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 1.536e-26
Identity = 76/242 (31.40%), Postives = 123/242 (50.83%), Query Frame = 2
Query:   71 FCLYRNRSVSRTSETGSSEPSVQPGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXP-RVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F +YR R   + S T               +++I  + +F  + +  AT  FS+ N+IG G FGEV+ G+L +G  VAIK+   A  Q   EF +EV  +A + HRNLV LLG+C E   + L+YE++PN S+   L+ P++  + +L++  R +I                  ++H+D K +N+L+D D   K+AD G+    G       + ++     ++  E     +FS +SDVYSF
Sbjct:  301 FVVYRRRKSYQGSST---------------DITITHSLQFDFKAIEDATNKFSESNIIGRGGFGEVFMGVL-NGTEVAIKRLSKASRQGAREFKNEVVVVAKLHHRNLVKLLGFCLEGEEKILVYEFVPNKSLDYFLFDPTK--QGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSF 524          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.989e-26
Identity = 76/247 (30.77%), Postives = 124/247 (50.20%), Query Frame = 2
Query:   86 NRSVSRTSETGSSEPSVQ-PGRNVGIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQD----------GMLVAIKKRPGAPTQ---EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            ++ +SR    GSS  S     R  G  L     + F + EL  AT+NF   +++GEG FG V+KG + +          G+++A+K+      Q   E++ E+ +L  + H NLV L+GYC E   + L+YE++  GS+  HL+       Q L +  R+ +               P+V+++DFK +N+L+D ++ AK++D GL       D +  S++V   + + A E       S KSDVYSF
Sbjct:   21 SKFLSRDGSKGSSTASFSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRG-TFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSF 266          

HSP 2 Score: 24.6386 bits (52), Expect = 1.989e-26
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 3
Query:  783 FGVFLLELVSGREA 824
            FGV LLEL+SGR A
Sbjct:  266 FGVVLLELLSGRRA 279          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAK3_ARATH (Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.006e-26
Identity = 77/213 (36.15%), Postives = 113/213 (53.05%), Query Frame = 2
Query:  155 GIELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQE---FIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            G  LS  + + F  E +  AT  + +  ++G+G  G VYKG+L D  +VAIKK   A +++   FI EV  L+ I HRN+V +LG C E  +  L+YE+I NG++  HL+G    S    E + R++I               P ++H+D KTAN+L+DE+  AKVAD G    +   D    ++ V     +L  E       +EKSDVYSF
Sbjct:  392 GAGLSNIDFKIFTEEGMKEATNGYDESRILGQGGQGTVYKGILPDNTIVAIKKARLADSRQVDQFIHEVLVLSQINHRNVVKILGCCLETEVPLLVYEFITNGTLFDHLHGSIFDSSLTWEHRLRIAIEVAGTLAYLHSSASIP-IIHRDIKTANILLDENLTAKVADFGASKLI-PMDKEQLTTMVQGTLGYLDPEYYTTGLLNEKSDVYSF 602          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 73/208 (35.10%), Postives = 110/208 (52.88%), Query Frame = 2
Query:  170 IREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPT---QEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            + + + F   EL  AT NF+D  +IG+G  G VYKG+L DG  VA+KK         QEFI+EV  L+ I HR++V LLG C E  +  L+YE+IPNG++  HL+            + R+++               P + H+D K+ N+L+DE + AKV+D G    +   D    ++ ++    ++  E      F+EKSDVYSF
Sbjct:  436 VEKTKLFSSRELEKATDNFNDNRVIGQGGQGTVYKGMLVDGRSVAVKKSNVVDEDKLQEFINEVIILSQINHRHVVKLLGCCLETEVPILVYEFIPNGNLFQHLHEEFDDYTALWGVRMRIAVDISGAFSYLHTAACSP-IYHRDIKSTNILLDEKYRAKVSDFGTSRSVS-IDHTHWTTVISGTVGYVDPEYYGSSHFTEKSDVYSF 641          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 72/206 (34.95%), Postives = 110/206 (53.40%), Query Frame = 2
Query:  176 EARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKR---PGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSIXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            + + F  E +  AT  + +  ++G+G  G VYKG+L D  +VAIKK      +  ++FI+EV  L+ I HRN+V LLG C E  +  L+YE+I +G++  HL+G    S    E + R+++               P ++H+D KTAN+L+DE+  AKVAD G    +   D    ++ V     +L  E       +EKSDVYSF
Sbjct:  394 DVKIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIP-IIHRDIKTANILLDENLTAKVADFGASRLI-PMDKEDLATMVQGTLGYLDPEYYNTGLLNEKSDVYSF 597          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.620e-26
Identity = 74/213 (34.74%), Postives = 115/213 (53.99%), Query Frame = 2
Query:  161 ELSIREARRFQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRPGAPTQ----EFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLSI-XXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            E+ + + +RF + EL +A+ NFS+KN++G G FG+VYKG L DG LVA+K+     TQ    +F  EV  ++   HRNL+ L G+C     + L+Y Y+ NGSV+  L    + S+  L++  R  I                P+++H+D K AN+L+DE+F A V D GL   +   D    ++ V      +A E     + SEK+DV+ +
Sbjct:  268 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPE-SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGY 478          
BLAST of CX077946 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.356e-26
Identity = 71/203 (34.98%), Postives = 114/203 (56.16%), Query Frame = 2
Query:  188 FQMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKK---RPGAPTQEFIDEVRFLASIQHRNLVTLLGYCQENNLQFLIYEYIPNGSVSIHLYGPSQVSRQKLEFKHRLS-IXXXXXXXXXXXXXXXPRVVHKDFKTANVLVDEDFIAKVADAGLRNFLGRTDVAGPSSQVTADEIFLASEVKEFRRFSEKSDVYSF 784
            F + +L LAT  F+  N++GEG +G VY+G L +G  VA+KK     G   +EF  EV  +  ++H+NLV LLGYC E   + L+YEY+ +G++   L+G  +     L ++ R+  I               P+VVH+D K +N+L+D++F AK++D GL   L   + +  +++V     ++A E       +EKSD+YSF
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMR-QHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGE-SHITTRVMGTFGYVAPEYANTGLLNEKSDIYSF 371          

HSP 2 Score: 21.9422 bits (45), Expect = 3.356e-26
Identity = 8/13 (61.54%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  783 FGVFLLELVSGRE 821
            FGV LLE ++GR+
Sbjct:  371 FGVLLLEAITGRD 383          
The following BLAST results are available for this feature:
BLAST of CX077946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 305
Match NameE-valueIdentityDescription
Y5457_ARATH8.951e-2735.35Probable LRR receptor-like serine/threonine-protei... [more]
CRK6_ARATH9.005e-2733.02Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
WAKLA_ARATH1.176e-2636.28Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
CRK14_ARATH1.536e-2631.40Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
NAK_ARATH1.989e-2630.77Probable serine/threonine-protein kinase NAK OS=Ar... [more]
WAK3_ARATH2.006e-2636.15Wall-associated receptor kinase 3 OS=Arabidopsis t... [more]
WAKLL_ARATH2.620e-2635.10Putative wall-associated receptor kinase-like 13 O... [more]
WAK4_ARATH2.620e-2634.95Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
BAK1_ARATH2.620e-2634.74BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y2296_ARATH3.356e-2634.98Probable receptor-like protein kinase At2g42960 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_6A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-6A04-A8-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX077946 ID=CX077946; Name=CX077946; organism=Citrus sinensis; type=EST; length=861bp
CCTTGCAGCAATATTTGGAGCTGCTGCAGGAGCTGTGGCATTGATGGGAA
TAATTTTCTTTCTTAGTTGGTTCTGCTTGTATCGAAATCGGAGTGTTTCC
AGAACTTCTGAGACAGGGTCTTCAGAGCCATCTGTTCAACCGGGAAGAAA
TGTCGGGATCGAGTTATCAATTCGAGAAGCTAGGCGATTTCAGATGGAAG
AGTTGTCTTTGGCCACCAAAAACTTTAGTGATAAAAACTTGATTGGAGAA
GGAAAGTTTGGGGAGGTATACAAGGGATTGCTTCAAGATGGGATGCTTGT
AGCCATCAAAAAGCGACCTGGAGCACCTACTCAGGAATTTATTGATGAGG
TACGCTTCCTTGCATCTATTCAACATCGGAATCTTGTCACTCTTCTGGGT
TACTGTCAAGAAAATAATTTACAATTTCTTATATACGAGTATATACCCAA
TGGAAGTGTTTCCATTCACCTGTATGGACCCAGTCAAGTTTCCCGACAGA
AGCTAGAGTTCAAGCATAGACTTTCAATAGCTCTTGGGGCAGCTAAAGGT
CTGGCTCATCTTCACTCCCTGAGTCCACGTGTAGTACATAAGGATTTTAA
AACAGCAAATGTTCTTGTTGATGAAGATTTCATAGCTAAGGTTGCAGATG
CAGGACTTCGTAATTTTCTAGGGAGAACCGATGTTGCAGGGCCATCCTCA
CAAGTGACAGCAGATGAGATATTTCTTGCTTCAGAGGTGAAAGAGTTCAG
AAGATTTTCAGAAAAAAGTGATGTGTATAGTTTTTGGGGTTTTTCTTTTG
GAGCTAGTAAGCGGGCGAGAAGCATCATCTTCACTGTCTCCAGATTCCAG
TCAGGACCTGG
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